Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MJ615_RS08095 Genome accession   NZ_CP092648
Coordinates   1704370..1704966 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KP7728     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1699370..1709966
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJ615_RS08075 - 1699563..1701320 (-) 1758 WP_004147851.1 Lon protease family protein -
  MJ615_RS08080 matP 1701506..1701958 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  MJ615_RS08085 ompA 1702089..1703159 (-) 1071 WP_002898408.1 porin OmpA -
  MJ615_RS08090 sulA 1703512..1704021 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  MJ615_RS08095 sxy/tfoX 1704370..1704966 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  MJ615_RS08100 yccS 1704980..1707115 (-) 2136 WP_002898422.1 YccS family putative transporter -
  MJ615_RS08105 - 1707133..1707579 (-) 447 WP_004224032.1 YccF domain-containing protein -
  MJ615_RS08110 helD 1707704..1709758 (+) 2055 WP_240289436.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=659555 MJ615_RS08095 WP_004179217.1 1704370..1704966(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP7728]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=659555 MJ615_RS08095 WP_004179217.1 1704370..1704966(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP7728]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51