Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MKZ88_RS16715 Genome accession   NZ_CP092635
Coordinates   3442695..3443321 (-) Length   208 a.a.
NCBI ID   WP_038985580.1    Uniprot ID   -
Organism   Enterobacter cloacae strain EFN743     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3437695..3448321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKZ88_RS16700 (MKZ88_16700) helD 3437933..3439987 (-) 2055 WP_038985577.1 DNA helicase IV -
  MKZ88_RS16705 (MKZ88_16705) - 3440110..3440556 (+) 447 WP_013097253.1 YccF domain-containing protein -
  MKZ88_RS16710 (MKZ88_16710) yccS 3440576..3442738 (+) 2163 WP_014831317.1 YccS family putative transporter -
  MKZ88_RS16715 (MKZ88_16715) sxy/tfoX 3442695..3443321 (-) 627 WP_038985580.1 TfoX/Sxy family DNA transformation protein Regulator
  MKZ88_RS16720 (MKZ88_16720) sulA 3443539..3444048 (+) 510 WP_013097256.1 SOS-induced cell division inhibitor SulA -
  MKZ88_RS16725 (MKZ88_16725) ompA 3444403..3445458 (+) 1056 WP_028027914.1 porin OmpA -
  MKZ88_RS16730 (MKZ88_16730) matP 3445522..3445974 (-) 453 WP_013097258.1 macrodomain Ter protein MatP -
  MKZ88_RS16735 (MKZ88_16735) - 3446161..3447921 (+) 1761 WP_096897018.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24060.61 Da        Isoelectric Point: 9.3869

>NTDB_id=659466 MKZ88_RS16715 WP_038985580.1 3442695..3443321(-) (sxy/tfoX) [Enterobacter cloacae strain EFN743]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEESAKYYVKNGSSFLTLMKRGRPILLN
YYRVDDGLWQDRERLLQLSSYALNAARKERIQRYQRNRLKDLPNLTFQLEVLLCEAGITNEDTLRSLGARTSWLKLRAKN
KALSIKVLFALEGAIEGLHEAALPAEIRRELTEWFNALPEPQENRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=659466 MKZ88_RS16715 WP_038985580.1 3442695..3443321(-) (sxy/tfoX) [Enterobacter cloacae strain EFN743]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCATTAGGAGAAATTCATCATCGTGCGCT
TTTTGGTGGCTATACCCTGGCCGTCGATGAGGCGGTGTTTGCCATGGTGTCAGACGGTGAGCTTTACCTTCGCGCCTGTG
AGGAAAGTGCGAAGTACTATGTAAAAAACGGATCCTCCTTTTTGACCTTAATGAAACGCGGCCGGCCGATCCTTCTCAAC
TATTATCGTGTGGATGACGGTCTCTGGCAGGACAGGGAGCGGCTGCTTCAGCTTTCCTCTTACGCGCTTAATGCCGCGCG
TAAAGAGCGCATACAACGCTACCAGCGAAACCGGCTAAAGGATCTGCCCAACCTGACTTTTCAGCTGGAAGTGCTGCTCT
GTGAAGCCGGGATTACCAACGAAGATACCCTCCGGTCGCTGGGAGCCAGAACGAGCTGGCTAAAGCTGCGGGCAAAAAAT
AAAGCGCTCAGTATCAAAGTACTGTTTGCCCTGGAAGGGGCGATTGAAGGCCTGCATGAAGCGGCACTCCCGGCGGAAAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCGCTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.635

97.596

0.562