Detailed information NTG0065939

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: SMCB_RS04295
• Genome accession: NZ_AP014569
• Coordinates: 908294..909400 (-)
• Length: 368 a.a.
• NCBI ID: WP_045535332.1
• Uniprot ID: -
• Organism: Serpentinimonas maccroryi strain B1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 903294..914400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMCB_RS04270 (SMCB_0865)	trmD	903662..904411 (+)	750	WP_045537606.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
SMCB_RS04275 (SMCB_0866)	rplS	904566..904922 (+)	357	WP_029461492.1	50S ribosomal protein L19	-
SMCB_RS04280 (SMCB_0867)	-	904986..906308 (+)	1323	WP_045535328.1	DUF3422 family protein	-
SMCB_RS04285 (SMCB_0868)	-	906352..907638 (-)	1287	WP_052468413.1	NAD(P)/FAD-dependent oxidoreductase	-
SMCB_RS04290 (SMCB_0869)	-	907654..908025 (-)	372	WP_082027223.1	c-type cytochrome	-
SMCB_RS04295 (SMCB_0870)	pilA	908294..909400 (-)	1107	WP_045535332.1	signal recognition particle-docking protein FtsY	Machinery gene
SMCB_RS04300 (SMCB_0871)	-	909543..910952 (+)	1410	WP_231851248.1	M16 family metallopeptidase	-
SMCB_RS04305 (SMCB_0872)	-	911000..912304 (+)	1305	WP_045535336.1	M16 family metallopeptidase	-
SMCB_RS04310 (SMCB_0873)	rsmD	912301..913023 (+)	723	WP_045535338.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
SMCB_RS04315 (SMCB_0874)	coaD	913020..913568 (+)	549	WP_082027225.1	pantetheine-phosphate adenylyltransferase	-
SMCB_RS04320 (SMCB_0875)	-	913582..913848 (+)	267	WP_045535340.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 38166.61 Da
• Isoelectric Point: 6.6575

>NTDB_id=65939 SMCB_RS04295 WP_045535332.1 908294..909400(-) (pilA) [Serpentinimonas maccroryi strain B1]
MFSYLKKKFFSGAPEPAAPADAPPPPAAAPHAAALEAQQAPTAAASSSNPAPPSTTAPDATLSRLSWFERLKSGLRKTGS
SIGSVFIGTQIDEALYEELEAALLQADTGVQATQYLLDDLRLRVKASKATDPAAVKALLAAALADLLRPLQQSLPIGAQP
DGPTVLMIAGVNGAGKTTTIGKLTWHLSNAGASVLLAAADTFRAAAREQLGVWAARNTVEVISQQGGDPAAVSFDAVTAG
RARGRDVVIIDTAGRLPTQLHLMEELKKIKRVIQKADPSAPHEVLLVIDGNTGQNALAQVKAFDAALGLTGLVVTKLDGT
AKGGVLAAIATWGRERGAVVPVYFIGVGEQLADLQTFDAQEFAQALLH

Nucleotide

• Length: 1107 bp

>NTDB_id=65939 SMCB_RS04295 WP_045535332.1 908294..909400(-) (pilA) [Serpentinimonas maccroryi strain B1]
ATGTTCAGTTACCTGAAGAAAAAATTTTTCTCTGGCGCGCCAGAGCCCGCCGCGCCGGCCGATGCGCCTCCGCCGCCGGC
TGCAGCGCCCCATGCAGCCGCGCTCGAGGCGCAACAAGCGCCCACCGCAGCCGCAAGCAGCTCCAACCCGGCTCCACCCA
GCACCACCGCGCCCGATGCCACCCTCAGCCGCCTATCCTGGTTCGAGCGCCTCAAGTCGGGCTTGCGCAAGACCGGCAGC
AGCATCGGCAGCGTGTTCATCGGCACCCAGATCGACGAGGCGCTGTACGAAGAGCTCGAAGCCGCGCTGCTGCAAGCCGA
TACCGGCGTGCAGGCCACCCAGTATCTGCTCGACGACTTGCGCCTGCGCGTCAAGGCCAGCAAGGCCACCGACCCGGCCG
CCGTCAAGGCGCTGCTGGCCGCGGCGCTGGCCGACTTGCTGCGTCCCTTGCAGCAGTCGCTGCCCATCGGCGCCCAGCCC
GACGGCCCCACGGTGCTGATGATCGCTGGCGTCAACGGCGCCGGCAAAACCACCACCATCGGCAAGCTCACCTGGCACCT
GTCCAACGCCGGCGCCAGCGTGCTGTTGGCCGCCGCCGACACCTTTAGAGCCGCCGCGCGCGAGCAGCTCGGGGTCTGGG
CGGCGCGCAATACGGTCGAGGTCATCAGTCAGCAAGGCGGCGACCCGGCGGCGGTGAGCTTCGACGCCGTCACGGCCGGC
CGTGCGCGCGGGCGCGACGTGGTGATCATCGACACCGCCGGGCGCCTACCGACCCAGCTGCACCTGATGGAGGAGCTCAA
AAAAATCAAGCGCGTGATCCAGAAAGCCGACCCCAGCGCGCCGCACGAGGTGCTGCTGGTGATCGACGGCAACACCGGGC
AGAACGCGCTGGCGCAAGTCAAGGCCTTCGATGCCGCGCTGGGCCTGACCGGGCTGGTGGTGACCAAGCTCGACGGCACC
GCCAAAGGCGGCGTGCTGGCCGCCATCGCCACCTGGGGGCGCGAGCGCGGCGCCGTGGTGCCGGTGTACTTCATCGGCGT
GGGCGAACAGCTGGCCGACTTGCAAACCTTTGATGCGCAGGAGTTCGCTCAGGCTTTGCTGCATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (80-142)

• SRP54-type protein, GTPase domain (SRP54) (163-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.168	98.641	0.524