Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MKS87_RS07725 Genome accession   NZ_CP092631
Coordinates   1471364..1471939 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain YB-15     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1466364..1476939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKS87_RS07695 (MKS87_07695) dapD 1466550..1467260 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MKS87_RS07700 (MKS87_07700) dapI 1467330..1468454 (+) 1125 WP_032721474.1 N-acetyldiaminopimelate deacetylase -
  MKS87_RS07705 (MKS87_07705) ykuS 1468516..1468761 (+) 246 WP_003232382.1 YkuS family protein -
  MKS87_RS07710 (MKS87_07710) mscT 1468798..1469601 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  MKS87_RS07715 (MKS87_07715) ahpA 1469838..1470380 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  MKS87_RS07720 (MKS87_07720) ykuV 1470452..1470898 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  MKS87_RS07725 (MKS87_07725) rok 1471364..1471939 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  MKS87_RS07730 (MKS87_07730) cse15 1471980..1472945 (-) 966 WP_029317734.1 spore protein Cse15 -
  MKS87_RS07735 (MKS87_07735) mobA 1473082..1473681 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  MKS87_RS07740 (MKS87_07740) moeB 1473732..1474751 (+) 1020 WP_173614061.1 molybdopterin-synthase adenylyltransferase MoeB -
  MKS87_RS07745 (MKS87_07745) glp 1474769..1476061 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  MKS87_RS07750 (MKS87_07750) mobB 1476022..1476543 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=659347 MKS87_RS07725 WP_003232378.1 1471364..1471939(+) (rok) [Bacillus subtilis strain YB-15]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=659347 MKS87_RS07725 WP_003232378.1 1471364..1471939(+) (rok) [Bacillus subtilis strain YB-15]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1