Detailed information NTG0659337

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: MKS87_RS06130
• Genome accession: NZ_CP092631
• Coordinates: 1184470..1185423 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain YB-15
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1179470..1190423

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKS87_RS06105 (MKS87_06105)	argF	1181302..1182261 (+)	960	WP_041336616.1	ornithine carbamoyltransferase	-
MKS87_RS06110 (MKS87_06110)	yjzC	1182347..1182526 (+)	180	WP_003245356.1	YjzC family protein	-
MKS87_RS06115 (MKS87_06115)	yjzD	1182572..1182757 (-)	186	WP_029317607.1	DUF2929 domain-containing protein	-
MKS87_RS06120 (MKS87_06120)	-	1183007..1183741 (+)	735	WP_032721340.1	hypothetical protein	-
MKS87_RS06125 (MKS87_06125)	-	1183823..1184380 (+)	558	WP_197196209.1	hypothetical protein	-
MKS87_RS06130 (MKS87_06130)	med	1184470..1185423 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
MKS87_RS06135 (MKS87_06135)	comZ	1185438..1185629 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
MKS87_RS06140 (MKS87_06140)	yjzB	1185659..1185898 (-)	240	WP_003232972.1	spore coat protein YjzB	-
MKS87_RS06145 (MKS87_06145)	fabH	1186063..1187001 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
MKS87_RS06150 (MKS87_06150)	fabF	1187024..1188265 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
MKS87_RS06155 (MKS87_06155)	yjaZ	1188341..1189126 (+)	786	WP_038428784.1	DUF2268 domain-containing protein	-
MKS87_RS06160 (MKS87_06160)	appD	1189318..1190304 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=659337 MKS87_RS06130 WP_014476425.1 1184470..1185423(+) (med) [Bacillus subtilis strain YB-15]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=659337 MKS87_RS06130 WP_014476425.1 1184470..1185423(+) (med) [Bacillus subtilis strain YB-15]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997