Detailed information NTG0659331

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG625_RS25015
• Genome accession: NZ_CP108356
• Coordinates: 5428419..5429459 (+)
• Length: 346 a.a.
• NCBI ID: WP_329385202.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01351
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5423419..5434459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG625_RS24995 (OG625_25030)	-	5423812..5425158 (-)	1347	WP_329385194.1	GH1 family beta-glucosidase	-
OG625_RS25000 (OG625_25035)	-	5425164..5425988 (-)	825	WP_329385197.1	carbohydrate ABC transporter permease	-
OG625_RS25005 (OG625_25040)	-	5425985..5426890 (-)	906	WP_329390934.1	sugar ABC transporter permease	-
OG625_RS25010 (OG625_25045)	-	5426988..5428316 (-)	1329	WP_329385200.1	extracellular solute-binding protein	-
OG625_RS25015 (OG625_25050)	cytR	5428419..5429459 (+)	1041	WP_329385202.1	LacI family DNA-binding transcriptional regulator	Regulator
OG625_RS25025 (OG625_25060)	orn	5429676..5430278 (-)	603	WP_329385205.1	oligoribonuclease	-
OG625_RS25030 (OG625_25065)	-	5430396..5431568 (-)	1173	WP_329385208.1	helix-turn-helix domain-containing protein	-
OG625_RS25035 (OG625_25070)	-	5431945..5432358 (-)	414	WP_329385211.1	hypothetical protein	-
OG625_RS25040 (OG625_25075)	-	5432680..5433213 (+)	534	WP_329385214.1	universal stress protein	-
OG625_RS25045 (OG625_25080)	-	5433312..5433878 (+)	567	WP_329385215.1	acetate uptake transporter	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 36638.63 Da
• Isoelectric Point: 6.5082

>NTDB_id=659331 OG625_RS25015 WP_329385202.1 5428419..5429459(+) (cytR) [Streptomyces sp. NBC_01351]
MNGHARGGGRPTLEEVAARAGVGRGTVSRVVNGSSKVSERTRVAVERAVAELGYVPNRAARALAANRTDAIALVIPEPES
RFFAEPYFSDVVRGVGAALAETDVQLVLTLAGGDRERRRLAQYLTGHRVDGVLLVSVHAGDPLPEMLAELGIPTVISGRR
SADEPLPCVDSDNLAGAAEAVRHLLGRGRRAIATITGPLDVYGAQCRLDGYRQALAAAGHPVDEELIAIGDFTEDGGRRA
MRELLERRPALDAVFACSDVMAAGARRELRAAGRRIPEDVALVGFDDSVVARHMDPPLTSVRQPIEEMGRTMARMLLERI
GGAGDSGGAGDVGVVLPNRLVVRESS

Nucleotide

• Length: 1041 bp

>NTDB_id=659331 OG625_RS25015 WP_329385202.1 5428419..5429459(+) (cytR) [Streptomyces sp. NBC_01351]
ATGAACGGGCATGCGCGCGGTGGGGGACGGCCGACGCTCGAGGAGGTCGCCGCGCGGGCCGGAGTCGGCCGGGGCACGGT
CTCCCGGGTGGTCAACGGTTCCTCCAAGGTCAGCGAGCGGACCAGGGTCGCCGTCGAGCGGGCCGTCGCCGAGCTGGGGT
ACGTGCCCAACCGCGCGGCCAGGGCGCTCGCCGCCAACCGGACGGACGCCATCGCGCTCGTGATCCCCGAGCCCGAGTCG
CGCTTCTTCGCCGAGCCGTACTTCTCCGACGTGGTCCGCGGGGTCGGCGCCGCCCTCGCCGAGACCGACGTCCAGCTCGT
CCTCACCCTGGCGGGCGGCGACCGCGAGCGCCGGCGCCTGGCCCAGTACCTGACCGGCCACCGCGTCGACGGGGTGCTGC
TCGTCTCCGTCCACGCGGGCGACCCGCTGCCGGAGATGCTCGCCGAGCTCGGCATCCCGACGGTGATCAGCGGCCGCCGC
TCCGCCGACGAGCCGCTGCCCTGCGTGGACTCCGACAACCTGGCGGGCGCCGCCGAGGCCGTACGCCACCTCCTGGGCCG
GGGCCGGCGCGCGATAGCCACGATCACCGGCCCGCTGGACGTGTACGGGGCCCAGTGCCGCCTCGACGGCTACCGGCAGG
CGCTGGCGGCCGCCGGACACCCCGTCGACGAGGAACTGATCGCGATCGGCGACTTCACCGAGGACGGCGGCCGCCGGGCC
ATGCGCGAGCTGCTGGAGCGCCGCCCCGCGCTGGACGCGGTCTTCGCGTGCTCGGACGTCATGGCGGCCGGCGCCCGCCG
GGAGCTGCGCGCGGCCGGGCGCCGGATCCCCGAGGACGTGGCACTGGTCGGCTTCGACGACTCGGTGGTGGCCCGGCACA
TGGACCCGCCGCTGACCAGCGTCCGCCAGCCCATCGAGGAGATGGGCCGGACCATGGCGCGGATGCTGCTGGAGCGGATC
GGCGGCGCGGGGGATTCCGGTGGGGCCGGGGACGTGGGCGTCGTCCTGCCGAACCGGCTCGTGGTCCGGGAATCCTCCTG
A

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-346)

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	37.83	98.555	0.373
cytR	Vibrio parahaemolyticus RIMD 2210633	37.353	98.266	0.367