Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MKS87_RS04610 Genome accession   NZ_CP092631
Coordinates   903554..904348 (+) Length   264 a.a.
NCBI ID   WP_173614007.1    Uniprot ID   -
Organism   Bacillus subtilis strain YB-15     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 898554..909348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKS87_RS04580 (MKS87_04580) sxzA 899393..900424 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  MKS87_RS04585 (MKS87_04585) yfhB 900539..901420 (+) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  MKS87_RS04590 (MKS87_04590) yfhC 901508..902092 (+) 585 WP_032723010.1 nitroreductase -
  MKS87_RS04595 (MKS87_04595) yfhD 902131..902322 (-) 192 WP_003233561.1 YfhD family protein -
  MKS87_RS04600 (MKS87_04600) yfhE 902389..902499 (-) 111 WP_003223230.1 YfhE family protein -
  MKS87_RS04605 (MKS87_04605) yfhF 902554..903465 (-) 912 WP_173614006.1 TIGR01777 family oxidoreductase -
  MKS87_RS04610 (MKS87_04610) recX 903554..904348 (+) 795 WP_173614007.1 recombination regulator RecX Regulator
  MKS87_RS04615 (MKS87_04615) yfhH 904350..904664 (+) 315 WP_003244592.1 YfhH family protein -
  MKS87_RS04620 (MKS87_04620) yfhI 904807..906000 (+) 1194 WP_003243500.1 MFS transporter -
  MKS87_RS04625 (MKS87_04625) sspK 906032..906184 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  MKS87_RS04630 (MKS87_04630) yfhJ 906309..906578 (+) 270 WP_003243789.1 YfhJ family protein -
  MKS87_RS04635 (MKS87_04635) yfhK 906723..907241 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  MKS87_RS04640 (MKS87_04640) spdL 907326..907658 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  MKS87_RS04645 (MKS87_04645) ephM 907645..908505 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31063.29 Da        Isoelectric Point: 6.6686

>NTDB_id=659329 MKS87_RS04610 WP_173614007.1 903554..904348(+) (recX) [Bacillus subtilis strain YB-15]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSLPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=659329 MKS87_RS04610 WP_173614007.1 903554..904348(+) (recX) [Bacillus subtilis strain YB-15]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCTTCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992