Detailed information
Bioinformatically predicted
Overview
| Name | cytR | Type | Regulator |
| Locus tag | H7R08_RS22425 | Genome accession | NZ_AP022095 |
| Coordinates | 4668540..4669565 (+) | Length | 341 a.a. |
| NCBI ID | WP_000644904.1 | Uniprot ID | P0ACN8 |
| Organism | Escherichia coli strain WP4-S18-ESBL-08 | ||
| Function | promote competence gene expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4663540..4674565
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R08_RS22400 (WP4S18E08_43530) | metJ | 4663977..4664294 (+) | 318 | WP_000852812.1 | met regulon transcriptional regulator MetJ | - |
| H7R08_RS22405 (WP4S18E08_43540) | yiiX | 4664478..4665086 (+) | 609 | WP_000797341.1 | YiiX family permuted papain-like enzyme | - |
| H7R08_RS22410 (WP4S18E08_43550) | - | 4665093..4665716 (+) | 624 | WP_108429952.1 | TIGR02117 family protein | - |
| H7R08_RS22415 (WP4S18E08_43560) | rpmE | 4665771..4665983 (-) | 213 | WP_000710769.1 | 50S ribosomal protein L31 | - |
| H7R08_RS22420 (WP4S18E08_43570) | priA | 4666186..4668384 (+) | 2199 | WP_001301269.1 | primosomal protein N' | Machinery gene |
| H7R08_RS22425 (WP4S18E08_43580) | cytR | 4668540..4669565 (+) | 1026 | WP_000644904.1 | DNA-binding transcriptional regulator CytR | Regulator |
| H7R08_RS22430 (WP4S18E08_43590) | ftsN | 4669657..4670616 (+) | 960 | WP_000068828.1 | cell division protein FtsN | - |
| H7R08_RS22435 (WP4S18E08_43600) | hslV | 4670709..4671239 (+) | 531 | WP_000208242.1 | ATP-dependent protease subunit HslV | - |
| H7R08_RS22440 (WP4S18E08_43610) | hslU | 4671249..4672580 (+) | 1332 | WP_001293341.1 | HslU--HslV peptidase ATPase subunit | - |
| H7R08_RS22445 (WP4S18E08_43620) | menA | 4672647..4673573 (+) | 927 | WP_108429951.1 | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | - |
| H7R08_RS22450 (WP4S18E08_43630) | rraA | 4673666..4674151 (+) | 486 | WP_000872908.1 | ribonuclease E activity regulator RraA | - |
| H7R08_RS22455 (WP4S18E08_43640) | zapB | 4674236..4674481 (-) | 246 | WP_001296623.1 | septal ring assembly protein ZapB | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37819.78 Da Isoelectric Point: 6.3842
>NTDB_id=65919 H7R08_RS22425 WP_000644904.1 4668540..4669565(+) (cytR) [Escherichia coli strain WP4-S18-ESBL-08]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP
Nucleotide
Download Length: 1026 bp
>NTDB_id=65919 H7R08_RS22425 WP_000644904.1 4668540..4669565(+) (cytR) [Escherichia coli strain WP4-S18-ESBL-08]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGCGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGCGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cytR | Vibrio parahaemolyticus RIMD 2210633 |
64.179 |
98.24 |
0.63 |
| cytR | Vibrio cholerae C6706 |
65.443 |
95.894 |
0.628 |