Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG548_RS19615 Genome accession   NZ_CP108350
Coordinates   4441065..4442189 (+) Length   374 a.a.
NCBI ID   WP_329546253.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01356     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4436065..4447189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG548_RS19600 (OG548_19580) - 4436779..4437492 (+) 714 WP_266463896.1 hypothetical protein -
  OG548_RS19605 (OG548_19585) - 4437526..4439376 (-) 1851 WP_329546252.1 hypothetical protein -
  OG548_RS19610 (OG548_19590) radA/sms 4439584..4440993 (+) 1410 WP_266456941.1 DNA repair protein RadA Machinery gene
  OG548_RS19615 (OG548_19595) disA 4441065..4442189 (+) 1125 WP_329546253.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG548_RS19620 (OG548_19600) - 4442243..4443070 (-) 828 WP_329546254.1 hypothetical protein -
  OG548_RS19625 (OG548_19605) - 4443415..4444329 (+) 915 WP_266456949.1 A/G-specific adenine glycosylase -
  OG548_RS19630 (OG548_19610) - 4444640..4445191 (+) 552 WP_266456951.1 SigE family RNA polymerase sigma factor -
  OG548_RS19635 (OG548_19615) - 4445215..4445922 (+) 708 WP_329546255.1 hypothetical protein -
  OG548_RS19640 (OG548_19620) cseB 4445962..4446678 (+) 717 WP_329546256.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40178.01 Da        Isoelectric Point: 5.0095

>NTDB_id=659024 OG548_RS19615 WP_329546253.1 4441065..4442189(+) (disA) [Streptomyces sp. NBC_01356]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVDFTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELHALTHAELLELPTVARALGYTGSPEALDSAVSPRGYRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=659024 OG548_RS19615 WP_329546253.1 4441065..4442189(+) (disA) [Streptomyces sp. NBC_01356]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTCGAGCGGATCCTCCGCGGCAACACCGGAGGACTCATCGTGC
TCGGGTCCGACAAGACCGTCGAGGCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCGACACGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTGCAGCTGGTGCC
CGACCCGATGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGACTTCACGG
TCGTCTCGGTTTCCCAGTCGATGCGCCTGATCGCCCTCTACGTGGACGGGCAGCGCCGCGTCCTCGAAGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGTCTCGACGAGGTCGCGGGCACGCTGTC
GGCCCTCGAGATCGAAGACCTGGTCACGGTCCGCGATGTCTCGGCGGTGGCCCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGGCGCCTTCTCGCGCTCCAGCTCGACGAGTTGATCGCC
GGCGTCGAACCCGAGCGTGAACTCGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTCTCCGAGCTCCACGCGCTCACCCACGCCGAGCTGCTCGAACTCCCCACGGTGGCACGGGCGTTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCCGTCTCCCCGCGCGGCTACCGCCTCCTCGCCAAGGTGCCCCGCCTGCCCGGCGCG
ATCATCGACCGCCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTCCGTGAGGGCCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43