Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG548_RS11205 Genome accession   NZ_CP108350
Coordinates   2591820..2592596 (+) Length   258 a.a.
NCBI ID   WP_266474334.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01356     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2586820..2597596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG548_RS11190 (OG548_11180) - 2587014..2587547 (+) 534 WP_329545144.1 TerD family protein -
  OG548_RS11195 (OG548_11185) - 2587687..2590587 (-) 2901 WP_329545145.1 vitamin B12-dependent ribonucleotide reductase -
  OG548_RS11200 (OG548_11190) nrdR 2590738..2591301 (-) 564 WP_266833575.1 transcriptional regulator NrdR -
  OG548_RS11205 (OG548_11195) dinR/lexA 2591820..2592596 (+) 777 WP_266474334.1 transcriptional repressor LexA Regulator
  OG548_RS11210 (OG548_11200) - 2593005..2594981 (-) 1977 WP_329545146.1 ATP-dependent DNA helicase -
  OG548_RS11215 (OG548_11205) - 2595070..2596902 (-) 1833 WP_329550085.1 IucA/IucC family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27935.63 Da        Isoelectric Point: 7.4756

>NTDB_id=658995 OG548_RS11205 WP_266474334.1 2591820..2592596(+) (dinR/lexA) [Streptomyces sp. NBC_01356]
MTTTADSATITAQDRSQGRLEPVHAMNEAANHEGPKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSAQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLEGEATVKRFKREDGHVWLLPHNSAYQPI
PGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=658995 OG548_RS11205 WP_266474334.1 2591820..2592596(+) (dinR/lexA) [Streptomyces sp. NBC_01356]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCTGCGAATCATGAGGGGCCCAAGCGATCCCTGCCGGGCCGACCTCCAGGCATCCGGGCGGACAGCTCGGGCCTCA
CCGACCGGCAACGCCGGGTGATCGAGGTCATCAGGGACTCCGTGCAGCGGCGCGGCTACCCGCCGTCGATGCGGGAGATC
GGACAGGCTGTCGGCCTTTCCAGCACCTCCTCGGTCGCGCATCAACTGATGGCACTGGAGCGCAAGGGCTTCCTGCGGCG
CGACCCGCACCGCCCGCGCGCGTACGAGGTCAGGGGCTCGGACCAGTCCTCGGCACAGCCCACAGACACGGCGGGCAAGC
CGGCCGCGTCGTACGTCCCGCTCGTGGGCCGTATCGCCGCAGGTGGGCCCATCCTGGCCGAGGAGTCGGTGGAGGACGTG
TTCCCCCTCCCCCGCCAGCTGGTCGGCGACGGCGAGCTGTTCGTCCTGAAGGTCGTCGGTGACTCGATGATCGAGGCCGC
CATCTGCGACGGTGACTGGGTCACCGTCCGCCGCCAGCCGGTCGCGGAGAACGGCGACATCGTGGCCGCCATGCTCGAAG
GCGAGGCCACGGTGAAGCGCTTCAAGCGCGAGGACGGGCATGTGTGGCTCCTGCCGCACAACTCCGCGTACCAGCCGATT
CCCGGCGACGAGGCGACCATCCTCGGCAAGGTCGTGGCAGTGCTGCGGCGCGTCTAG

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.714

81.395

0.372