Detailed information NTG0658798

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG303_RS07965
• Genome accession: NZ_CP108316
• Coordinates: 1641523..1642548 (+)
• Length: 341 a.a.
• NCBI ID: WP_405866208.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00005
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1636523..1647548

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG303_RS07950 (OG303_07915)	-	1638209..1639081 (-)	873	WP_405866202.1	carbohydrate ABC transporter permease	-
OG303_RS07955 (OG303_07920)	-	1639085..1640011 (-)	927	WP_405866204.1	carbohydrate ABC transporter permease	-
OG303_RS07960 (OG303_07925)	-	1640008..1641369 (-)	1362	WP_405866206.1	ABC transporter substrate-binding protein	-
OG303_RS07965 (OG303_07930)	cytR	1641523..1642548 (+)	1026	WP_405866208.1	LacI family DNA-binding transcriptional regulator	Regulator
OG303_RS07970 (OG303_07935)	-	1642598..1643407 (-)	810	WP_405866210.1	SAM-dependent methyltransferase	-
OG303_RS07975 (OG303_07940)	-	1643566..1643811 (-)	246	WP_405866212.1	DUF397 domain-containing protein	-
OG303_RS07980 (OG303_07945)	-	1643815..1644681 (-)	867	WP_405866214.1	helix-turn-helix domain-containing protein	-
OG303_RS07985 (OG303_07950)	-	1645083..1645511 (+)	429	WP_405866216.1	ATP-binding protein	-
OG303_RS07990 (OG303_07955)	-	1645508..1646152 (+)	645	WP_405866218.1	DUF6624 domain-containing protein	-
OG303_RS07995 (OG303_07960)	-	1646257..1646751 (+)	495	WP_405866220.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36861.95 Da
• Isoelectric Point: 6.5784

>NTDB_id=658798 OG303_RS07965 WP_405866208.1 1641523..1642548(+) (cytR) [Streptomyces sp. NBC_00005]
MAGATLRDVARRAGVSIRTVSNVVNASVPVSDELRTRVEAALEELDYRPNLVARNLRRGRTGMLAFIVPELDVPYFAELA
REVITAARAHGYVVMLDQTDGDRERERELLSRESRATMFDGLLLSPLSISEDELRGRTNRVPVVLLGEHIFNGHFHHVAI
DNVAAAREATEHLIALGRRRIAAIGDQPYSTGETAQLRTIGYRQALTAAGLPLDESLVVPTPRFHRHLGAEAMNHLLALP
EPPDAVFCYNDLLAIGAMHALTRAGVRVPEDIAVVGVDGIQEGEYSSPTLTTIAPDKARIAHTAVSTLVGIIAGTASPPA
DSKAPYRLVVRGSTTSDSRAV

Nucleotide

• Length: 1026 bp

>NTDB_id=658798 OG303_RS07965 WP_405866208.1 1641523..1642548(+) (cytR) [Streptomyces sp. NBC_00005]
ATGGCCGGCGCAACCCTCCGTGACGTCGCCCGACGCGCGGGAGTCTCCATCCGCACGGTGTCCAATGTGGTCAATGCTTC
CGTGCCCGTCTCCGACGAGCTGCGGACCCGGGTCGAGGCGGCGCTGGAGGAACTCGACTACCGGCCCAACCTGGTCGCCC
GCAACCTTCGCCGGGGCCGCACCGGCATGCTCGCCTTCATCGTGCCGGAACTCGACGTCCCGTATTTCGCCGAGCTGGCC
CGTGAGGTCATCACCGCGGCCCGTGCCCACGGATACGTCGTCATGCTCGACCAGACGGACGGCGACCGCGAGCGGGAACG
GGAGCTGCTCAGCCGCGAATCACGCGCCACGATGTTCGACGGACTGCTGCTGAGCCCCCTGTCCATCTCCGAGGACGAAC
TGCGCGGCCGCACCAACCGGGTGCCCGTCGTCCTGCTCGGCGAGCACATCTTCAACGGCCACTTCCACCACGTGGCGATA
GACAATGTCGCCGCGGCCCGCGAGGCCACCGAGCACCTCATCGCCCTGGGGCGCAGGCGTATCGCCGCCATCGGTGACCA
GCCCTACAGCACCGGCGAAACCGCCCAACTGCGCACCATCGGTTACCGCCAGGCCCTGACAGCGGCCGGCCTGCCGCTCG
ACGAGAGCCTCGTCGTGCCCACGCCCCGCTTCCACCGGCACCTCGGCGCCGAGGCCATGAACCATCTCCTCGCCCTGCCC
GAACCACCCGACGCCGTCTTCTGCTACAACGACCTCCTCGCCATCGGCGCGATGCACGCGCTGACGCGCGCGGGAGTCCG
CGTTCCCGAAGACATCGCCGTGGTCGGTGTCGACGGCATCCAGGAGGGCGAGTACAGCTCGCCGACACTCACCACCATCG
CGCCCGACAAGGCCCGCATCGCGCACACGGCCGTCAGCACGCTCGTCGGGATCATCGCCGGCACGGCATCGCCACCGGCA
GACTCGAAGGCGCCGTACCGGTTGGTGGTGAGGGGCAGCACCACGAGCGACTCTCGAGCCGTGTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (170-334)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	38.416	100	0.384
cytR	Vibrio cholerae C6706	37.353	99.707	0.372