Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG933_RS19830 Genome accession   NZ_CP108304
Coordinates   4484623..4485747 (+) Length   374 a.a.
NCBI ID   WP_020132463.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00016     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4479623..4490747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG933_RS19815 (OG933_19790) - 4479900..4480778 (+) 879 WP_362522495.1 hypothetical protein -
  OG933_RS19820 (OG933_19795) - 4481073..4482857 (-) 1785 WP_405628109.1 BACON domain-containing protein -
  OG933_RS19825 (OG933_19800) radA/sms 4483133..4484542 (+) 1410 WP_020132462.1 DNA repair protein RadA Machinery gene
  OG933_RS19830 (OG933_19805) disA 4484623..4485747 (+) 1125 WP_020132463.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG933_RS19835 (OG933_19810) - 4485769..4486632 (-) 864 WP_405628111.1 hypothetical protein -
  OG933_RS19840 (OG933_19815) - 4486893..4487831 (+) 939 WP_405628114.1 A/G-specific adenine glycosylase -
  OG933_RS19845 (OG933_19820) - 4488132..4488674 (+) 543 WP_020132466.1 SigE family RNA polymerase sigma factor -
  OG933_RS19850 (OG933_19825) - 4488659..4489324 (+) 666 WP_362522491.1 hypothetical protein -
  OG933_RS19855 (OG933_19830) cseB 4489626..4490327 (+) 702 WP_020132468.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39985.73 Da        Isoelectric Point: 4.9989

>NTDB_id=658506 OG933_RS19830 WP_020132463.1 4484623..4485747(+) (disA) [Streptomyces sp. NBC_00016]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFAATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELNALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=658506 OG933_RS19830 WP_020132463.1 4484623..4485747(+) (disA) [Streptomyces sp. NBC_00016]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTGCCGACGGCCTGATGCGCGCCGCGCT
GAGCGCGGTGGCTCCCGGCACGGCCCTGCGCGACGGCCTGGAGCGGATCCTTCGCGGCAACACTGGCGGACTCATCGTGC
TGGGCTCCGACAAGACGGTCGAGGCGATGTGCACGGGCGGGTTCGTCCTGGACGTGGAGTTCGCGGCCACGCGCCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCCGACCTGTCGAAGATCCTCCGGGCCGGCGTCCAGCTGGTGCC
GGACCCCACGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGA
TCGTCTCCGTCTCCCAGTCCATGCGGCTGATCGCCCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGGCGGCTGCTCGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTTCCCGAGCCCACGGCCAAGCGGTCCCGCACGGTCGACGA
GGCGCTGTACGAGCTGAACGCGCTCAGTCACGCCGAGCTCCTCGAACTGTCCACGGTCGCCCGCGCGTTGGGCTACACCG
GCTCTCCCGAGGCCCTCGATTCGGCGGTCTCGCCCCGCGGCTTCCGCCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGTCTCGTCGAGCACTTCGGCGGCCTCCAGAAGCTCCTCGCCGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGCGTGGGCGAGGCACGGGCCCGGAGCGTCCGCGAGGGCCTGTCACGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438