Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG753_RS30465 Genome accession   NZ_CP108292
Coordinates   6509487..6510287 (-) Length   266 a.a.
NCBI ID   WP_327264806.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00029     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6504487..6515287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG753_RS30450 (OG753_30400) - 6504540..6505265 (+) 726 WP_405790904.1 GNAT family N-acetyltransferase -
  OG753_RS30455 (OG753_30405) - 6505365..6507329 (+) 1965 WP_405790906.1 IucA/IucC family protein -
  OG753_RS30460 (OG753_30410) - 6507382..6509352 (+) 1971 WP_327264805.1 ATP-dependent DNA helicase -
  OG753_RS30465 (OG753_30415) dinR/lexA 6509487..6510287 (-) 801 WP_327264806.1 transcriptional repressor LexA Regulator
  OG753_RS30470 (OG753_30420) nrdR 6510757..6511269 (+) 513 WP_327264807.1 transcriptional regulator NrdR -
  OG753_RS30475 (OG753_30425) - 6511414..6514302 (+) 2889 WP_327264808.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 28801.61 Da        Isoelectric Point: 7.4239

>NTDB_id=658166 OG753_RS30465 WP_327264806.1 6509487..6510287(-) (dinR/lexA) [Streptomyces sp. NBC_00029]
MTTTADSAAITAQNRSQSQSRLEPVHAMNDANLNPDAEPVVRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRG
YPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPIL
AEESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLP
HNAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 801 bp        

>NTDB_id=658166 OG753_RS30465 WP_327264806.1 6509487..6510287(-) (dinR/lexA) [Streptomyces sp. NBC_00029]
GTGACCACCACCGCAGACAGTGCCGCCATCACTGCCCAGAACCGCTCCCAGAGCCAGAGCCGACTCGAGCCGGTGCATGC
CATGAACGACGCAAACCTGAACCCGGATGCGGAGCCCGTAGTACGCCCCGCACGCTCGCTGCCAGGTCGACCTCCAGGCA
TCCGCGCCGACAGCTCCGGGCTCACGGACCGGCAGCGGAGGGTCATCGAGGTCATTCGCGACTCCGTCCAGCGGCGGGGT
TACCCGCCGTCCATGCGGGAGATCGGCCAGGCCGTCGGCCTGTCCAGCACGTCGTCGGTCGCCCACCAGCTGATGGCCCT
GGAGCGCAAGGGCTTCCTGCGCCGCGACCCGCACCGCCCCCGGGCCTACGAAGTGCGCGGCTCCGACCAGCCGAGCTCGC
AGCCCACGGACACGACGGGCAAGCCCGCCGCCTCCTACGTTCCCCTGGTCGGCCGGATCGCGGCCGGCGGCCCGATCCTC
GCCGAGGAGTCGGTCGAGGACGTGTTCCCGCTCCCCCGCCAGCTGGTCGGTGACGGTGAGCTCTTCGTCCTCAAGGTCGT
CGGCGACTCGATGATCGAGGCAGCCATCTGTGACGGCGACTGGGTCACGGTCCGTCGCCAGCCCGTCGCGGAGAACGGCG
ACATCGTCGCCGCGATGCTCGACGGCGAGGCCACCGTCAAGCGTTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTCCCG
CACAACGCCGCCTACCAGCCGATCCCCGGCGACGAGGCGACCATCCTCGGCAAGGTCGTCGCGGTACTGCGCCGGGTCTG
A

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(59-122)

Peptidase S24-like (Peptidase_S24)

(148-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

79.699

0.372