Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   MJ920_RS01775 Genome accession   NZ_CP092499
Coordinates   336134..336298 (+) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus velezensis strain YC_89     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 331134..341298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJ920_RS01760 - 333028..333570 (+) 543 WP_278269428.1 condensation domain-containing protein -
  MJ920_RS01765 (MJ920_01765) - 333527..334513 (+) 987 WP_278269429.1 condensation domain-containing protein -
  MJ920_RS01770 (MJ920_01770) - 334510..336069 (+) 1560 Protein_308 non-ribosomal peptide synthetase -
  MJ920_RS01775 (MJ920_01775) comS 336134..336298 (+) 165 WP_269465305.1 competence protein ComS Regulator
  MJ920_RS01780 srfAB 336244..339600 (+) 3357 Protein_310 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=658151 MJ920_RS01775 WP_269465305.1 336134..336298(+) (comS) [Bacillus velezensis strain YC_89]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=658151 MJ920_RS01775 WP_269465305.1 336134..336298(+) (comS) [Bacillus velezensis strain YC_89]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains


Predicted by InterproScan.

(9-52)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5