Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   MJ920_RS01730 Genome accession   NZ_CP092499
Coordinates   318664..319062 (-) Length   132 a.a.
NCBI ID   WP_043866822.1    Uniprot ID   -
Organism   Bacillus velezensis strain YC_89     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 313664..324062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJ920_RS01700 (MJ920_01700) - 314669..314827 (-) 159 Protein_294 molybdopterin dinucleotide binding domain-containing protein -
  MJ920_RS01705 (MJ920_01705) - 314942..316144 (+) 1203 WP_278269426.1 GTP-binding protein -
  MJ920_RS01710 (MJ920_01710) - 316209..317345 (+) 1137 WP_003156594.1 zinc-dependent alcohol dehydrogenase -
  MJ920_RS01715 (MJ920_01715) - 317360..317794 (+) 435 WP_003156592.1 RDD family protein -
  MJ920_RS01720 (MJ920_01720) - 317866..318186 (+) 321 WP_015388719.1 YckD family protein -
  MJ920_RS01725 (MJ920_01730) - 318405..318623 (+) 219 Protein_299 family 1 glycosylhydrolase -
  MJ920_RS01730 (MJ920_01735) nin/comJ 318664..319062 (-) 399 WP_043866822.1 competence protein ComJ Regulator
  MJ920_RS01735 (MJ920_01740) nucA/comI 319084..319521 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MJ920_RS01740 (MJ920_01745) hxlB 319880..320437 (-) 558 WP_014304318.1 6-phospho-3-hexuloisomerase -
  MJ920_RS01745 (MJ920_01750) hxlA 320434..321069 (-) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  MJ920_RS01750 (MJ920_01755) - 321301..321663 (+) 363 WP_014304320.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15014.99 Da        Isoelectric Point: 4.6564

>NTDB_id=658149 MJ920_RS01730 WP_043866822.1 318664..319062(-) (nin/comJ) [Bacillus velezensis strain YC_89]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=658149 MJ920_RS01730 WP_043866822.1 318664..319062(-) (nin/comJ) [Bacillus velezensis strain YC_89]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.744

97.727

0.75