Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG753_RS24150 Genome accession   NZ_CP108292
Coordinates   5156628..5157752 (-) Length   374 a.a.
NCBI ID   WP_327263784.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00029     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5151628..5162752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG753_RS24120 (OG753_24075) cseB 5151847..5152560 (-) 714 WP_327263779.1 two-component system response regulator CseB -
  OG753_RS24125 (OG753_24080) - 5152590..5153231 (-) 642 WP_405790093.1 hypothetical protein -
  OG753_RS24130 (OG753_24085) - 5153267..5153827 (-) 561 WP_030010715.1 SigE family RNA polymerase sigma factor -
  OG753_RS24135 (OG753_24090) - 5154013..5154954 (-) 942 WP_405790095.1 A/G-specific adenine glycosylase -
  OG753_RS24140 (OG753_24095) - 5154978..5155601 (-) 624 WP_405790097.1 phosphatase PAP2 family protein -
  OG753_RS24145 (OG753_24100) - 5155824..5156558 (+) 735 WP_327263783.1 hypothetical protein -
  OG753_RS24150 (OG753_24105) disA 5156628..5157752 (-) 1125 WP_327263784.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG753_RS24155 (OG753_24110) radA/sms 5157935..5159347 (-) 1413 WP_327263785.1 DNA repair protein RadA Machinery gene
  OG753_RS24160 (OG753_24115) - 5159635..5161398 (+) 1764 WP_405790099.1 BACON domain-containing protein -
  OG753_RS24165 (OG753_24120) - 5161440..5162192 (-) 753 WP_383196500.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40347.30 Da        Isoelectric Point: 4.9472

>NTDB_id=658147 OG753_RS24150 WP_327263784.1 5156628..5157752(-) (disA) [Streptomyces sp. NBC_00029]
MAAKDGAAASGKSGAGSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKNVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELAIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=658147 OG753_RS24150 WP_327263784.1 5156628..5157752(-) (disA) [Streptomyces sp. NBC_00029]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGCAAGTCGGGCGCCGGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCTTGGAACGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGTATGGACAAGAACGTCGAGGCGATGTGCACCGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTGCC
GGACGCCTCGATCCCGACGGAGGAGACGGGCACGCGCCACCGCACGGCCGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGTGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCACTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTGGCGGGCACGCTGTC
GGCGCTGGAGATCGAAGACCTGGTCACCGTCCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGTCTGCTGTCGCTGCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCTCTGACGCATCCGGAACTGCTGGAGCTGGCGATCGTGGCACGGGCGCTGGGGTACACGG
GCTCGCCGGAGACCCTGGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCGAAGGTTCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTTCTGGCGGCTTCGGTGGACGACCTCCAGGCCGTGGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGCGTCCGCGAGGGCCTCTCCCGCCTGGCCGAGTCGTCCATCCTGGAACGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447