Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   MKD39_RS01560 Genome accession   NZ_CP092478
Coordinates   339294..339962 (+) Length   222 a.a.
NCBI ID   WP_270069944.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain CGMH-SH51     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 334294..344962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKD39_RS01535 (MKD39_01530) wecB 334601..335740 (+) 1140 WP_037558335.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -
  MKD39_RS01540 (MKD39_01535) - 335835..336782 (+) 948 WP_037558334.1 LCP family protein -
  MKD39_RS01545 (MKD39_01540) - 336872..338347 (-) 1476 WP_037570986.1 alkaline phosphatase -
  MKD39_RS01550 (MKD39_01545) - 338746..338916 (+) 171 WP_162838896.1 hypothetical protein -
  MKD39_RS01555 (MKD39_01550) - 339100..339264 (+) 165 WP_162838897.1 hypothetical protein -
  MKD39_RS01560 (MKD39_01555) braR 339294..339962 (+) 669 WP_270069944.1 response regulator transcription factor Regulator
  MKD39_RS01565 (MKD39_01560) braS 339965..340861 (+) 897 WP_037558331.1 sensor histidine kinase Regulator
  MKD39_RS01570 (MKD39_01565) - 341045..341794 (+) 750 WP_046308943.1 ABC transporter ATP-binding protein -
  MKD39_RS01575 (MKD39_01570) - 341796..343787 (+) 1992 WP_046308945.1 ABC transporter permease -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25646.39 Da        Isoelectric Point: 4.5652

>NTDB_id=657925 MKD39_RS01560 WP_270069944.1 339294..339962(+) (braR) [Staphylococcus haemolyticus strain CGMH-SH51]
MKVFIVEDDFVIAESLEQELSKWNYEVIVAKQFDNISDVFNANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEITVKDCKLVVDEATLYHQDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=657925 MKD39_RS01560 WP_270069944.1 339294..339962(+) (braR) [Staphylococcus haemolyticus strain CGMH-SH51]
ATGAAAGTATTCATCGTGGAAGATGATTTTGTCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTAGCGACGTATTTAATGCAAATCAACCACAACTCGTGTTGCTCGATATCAATC
TACCGACGTTCAATGGTTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTGCCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCGATTCAAATGGGCGGCGATGATTTTATCGAGAAACCATTTAATTTATCGTTAAC
GGTAACTAAGATTCAAGCACTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAATTACAGTTAAAGACTGCA
AACTTGTTGTAGATGAAGCAACGCTATATCACCAAGACGAATCGGTTCAATTATCTTTTACTGAATTACAAATTTTAAAT
ATGTTGTTTCGTAATGAAGGTAAGTATGTTAGCCGTACAGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

99.55

0.784