Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   MJX77_RS09000 Genome accession   NZ_CP092454
Coordinates   1861595..1866097 (+) Length   1500 a.a.
NCBI ID   WP_252061241.1    Uniprot ID   -
Organism   Acinetobacter sp. AHP123     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1856595..1871097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJX77_RS08975 - 1857034..1857669 (-) 636 WP_252061239.1 hypothetical protein -
  MJX77_RS08980 pilG 1857955..1858338 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  MJX77_RS08985 - 1858362..1858724 (+) 363 WP_004789266.1 response regulator -
  MJX77_RS08990 - 1858784..1859320 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  MJX77_RS08995 - 1859365..1861446 (+) 2082 WP_252061240.1 methyl-accepting chemotaxis protein -
  MJX77_RS09000 chpA 1861595..1866097 (+) 4503 WP_252061241.1 hybrid sensor histidine kinase/response regulator Regulator
  MJX77_RS09005 - 1866097..1866564 (+) 468 WP_174743683.1 hypothetical protein -
  MJX77_RS09010 - 1866884..1867765 (+) 882 WP_252061242.1 alpha/beta fold hydrolase -
  MJX77_RS09015 dapE 1867873..1869006 (-) 1134 WP_252061243.1 succinyl-diaminopimelate desuccinylase -
  MJX77_RS09020 - 1869132..1869275 (-) 144 WP_003655297.1 entericidin A/B family lipoprotein -
  MJX77_RS09025 - 1869398..1870279 (-) 882 WP_013196913.1 DUF1853 family protein -
  MJX77_RS09030 - 1870383..1870751 (+) 369 WP_013196914.1 DUF454 family protein -

Sequence


Protein


Download         Length: 1500 a.a.        Molecular weight: 171331.74 Da        Isoelectric Point: 4.4337

>NTDB_id=657732 MJX77_RS09000 WP_252061241.1 1861595..1866097(+) (chpA) [Acinetobacter sp. AHP123]
MKEILKTLTEAMMLPEDSYSQQDAEFIDIFVEEIEEIFVELQSLIHEWMQSKNVATLTEIRRHFHTLKGSGRMIAAKSSA
ELAWTVEDTLNRIINESLTLTPNIQQYVQLVFKFYFVKLVDDFKSKKEHAVDFRPLILLGQQLQQQQSLEPALEELLLLS
DTLTAETKTGLEVNDLEPVSDNLTLETTIESEHNLAETLVLFMEEAEEHLATIDQFLEQEIHQHESYNALIRALHTLRGS
SAMAQVEAIFDASTKVEHLFKILLQEELSSHSEEILLLRDYRQFIRNCLDLLAAHCSNDQLDSNLKQFNQVWDAYMEQHE
EHSSPLMPPHGLVSQLLQLNVSELLDAELDFEKGIRSEFPHYLERLSEQADLLLQHTQSQAMVGLYEYTNQLKDSYDVLL
DRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQSVLEELKLYTQHIPSLNSEPLDNQDVVESLFSVDVEQT
SDESPASIESVLTDHVAMSQSMHLDRQFMTTEHVNRYFDPELLDIFLEEADELLEGMDTDLNIWVNDQENFAALNNLMRY
LHTLKGGANMIQANYIGLIAHELESIYERIIQRQLVASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKSAGK
VYESLGSVVKEMQAESETDVIPELNVEVLQQEAINDTALNLDELTSNFEQIVESNTRLVEHTELQIFDAEGYTDSIQDQD
IDSVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEKFALYHFSS
NIYDNLLESAIVWLKEAIFKQNYQHFDGLQHSLENIQFIETAIQIPSKLTRTDLFGTEPVMSFVQGDGTEPPPMMGAWEQ
TQHLEQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAKHGIEHS
RYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTESLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQRI
VRQTSTALDRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRVQREQAQKPETGRIELNIHRQGTDVVVTFK
DDGRGIDIEKVRQKALLSGLINSEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQG
TIFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPTSLEQYFGSAQEFFEFENKRYPLRYLSEFVGNQPIPRLS
GMMYSLPVLMIKANNGQTIALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHKS
LNETVYRQRESDERRLIMIVDDSVTVRKVTTRLLERQGYDVVTAKDGIDAIEQLENIKPDLMLLDIEMPRMDGFEVLNLV
RHHDLHQHMPVIMITSRTGEKHRERAFALGVSQYMGKPFQEEDLLHNIDAFFTTREEELA

Nucleotide


Download         Length: 4503 bp        

>NTDB_id=657732 MJX77_RS09000 WP_252061241.1 1861595..1866097(+) (chpA) [Acinetobacter sp. AHP123]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTATTCTCAACAAGATGCTGAATTTAT
TGATATCTTCGTTGAAGAAATTGAAGAAATTTTTGTTGAATTGCAATCTCTGATTCATGAATGGATGCAATCTAAAAATG
TTGCTACGCTGACTGAGATCCGTCGCCATTTTCATACCTTGAAAGGTTCAGGGCGAATGATTGCAGCGAAATCCTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGATCATCAATGAGAGTCTCACATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCGTTAAATTAGTAGATGACTTTAAATCTAAAAAGGAACATGCAGTAGATTTTA
GACCTCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTTTAGAGCCTGCTTTAGAAGAACTTTTATTATTGTCT
GATACTCTCACTGCGGAAACTAAGACTGGTTTAGAGGTGAATGATTTAGAGCCGGTGTCAGATAATTTAACCCTAGAAAC
CACGATAGAAAGTGAACATAATCTTGCTGAAACCTTAGTTTTATTTATGGAAGAAGCGGAAGAGCACTTAGCGACCATTG
ATCAATTTTTAGAACAAGAAATACATCAGCACGAAAGTTATAATGCGCTCATTCGTGCATTACATACATTGCGCGGTAGC
TCGGCAATGGCTCAGGTAGAAGCAATTTTTGATGCTAGTACGAAGGTTGAGCATTTATTCAAAATCTTATTACAAGAAGA
ACTTTCTTCTCATTCAGAAGAGATATTACTACTCCGTGATTATCGTCAGTTTATTCGAAATTGTTTAGATCTATTAGCTG
CGCATTGCTCTAATGACCAATTAGATTCAAATCTGAAACAGTTTAACCAAGTTTGGGATGCTTATATGGAGCAGCATGAG
GAGCATTCAAGCCCACTCATGCCTCCACATGGTCTGGTATCTCAGCTGTTACAGCTCAATGTTTCAGAATTACTTGATGC
AGAGTTAGATTTTGAGAAAGGAATTCGTTCTGAGTTTCCTCATTATCTTGAACGATTAAGTGAACAAGCTGACTTGTTAC
TGCAACATACTCAGTCTCAGGCCATGGTTGGTTTATATGAATATACGAACCAACTAAAAGATAGCTATGACGTATTGCTT
GATCGACCTGATTTATTGCAATCAGATTATGTTTTTGAAATTTATCAGAAAGCACATCAACAATTAATTCAGTTATTTGA
CGCATTAGCTGCGGGTCAACGAGTTAGTATTATTGAGCAACACCAAAGTGTTTTGGAAGAGCTAAAACTATATACCCAAC
ATATTCCAAGCCTTAATTCTGAACCATTAGATAATCAGGATGTTGTTGAGTCATTATTTAGTGTTGATGTAGAACAAACA
TCAGATGAATCTCCGGCATCTATCGAAAGTGTATTAACTGATCATGTAGCAATGAGTCAGAGTATGCATTTAGATCGCCA
ATTCATGACTACTGAGCACGTAAATCGTTATTTTGATCCAGAACTGTTAGATATTTTTCTTGAAGAAGCCGATGAGTTGC
TTGAAGGAATGGATACAGATCTTAATATTTGGGTTAATGATCAAGAGAACTTTGCTGCTCTTAATAACCTGATGCGTTAT
TTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAAATTATATTGGTTTAATTGCACATGAATTAGAAAGTATTTA
TGAGCGCATCATTCAAAGACAGTTGGTTGCTTCATCTGCTCTTATTGATTTTATCCGTCTGGTTCAAGATGATTTAGCTG
ACCGTCTACAAATAGTACGTGAGCAGCACCTAGATTATGCGGCTTCTCATACTATTCAAGCGCTTAAGAGTGCCGGTAAG
GTATATGAGTCACTTGGCTCTGTTGTTAAAGAGATGCAAGCAGAGTCTGAAACAGATGTTATACCAGAATTAAATGTTGA
AGTATTACAGCAAGAAGCTATAAACGATACTGCGTTAAATCTCGATGAGTTAACTTCTAATTTTGAGCAGATTGTTGAGT
CTAATACTCGACTTGTTGAGCACACAGAATTACAAATTTTTGATGCAGAAGGCTATACAGACAGTATCCAAGATCAGGAT
ATTGATTCTGTTGTCGAGCAGACATTTATGGAGGAAGCGGCCGAACTGTTAGAGATGGCCGATCATCTGTTAAAGCAATG
GTTTGAACAGCGTACCAATCGTAGTATCTTGCTTCAGCTACAAAGAGCAGTGCACAGTTTGAAGGGTGGTTCCCGTATGT
TGGGACTAGAAACTGTGCAAGCAATTGCTTATCAACTTGAGAATGCTTTTGAAAAATTTGCGCTTTATCATTTTAGCTCA
AATATTTATGATAACTTATTAGAGAGTGCGATTGTCTGGCTAAAAGAGGCAATTTTTAAGCAAAATTATCAACATTTCGA
TGGATTACAGCATAGTCTAGAAAATATTCAGTTTATTGAAACGGCAATTCAAATTCCGAGTAAATTGACTAGAACTGATC
TATTTGGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGATGGTACAGAACCACCGCCAATGATGGGTGCATGGGAACAA
ACGCAGCATCTTGAACAAAACAATGAGATGATTCGTGTTTCAGCAGATTTAATCGAGAAAATGATTGATTTATCTGGTGA
AAATTCAATTAACCGTTCACGAATTGAAATGGATCTAAGTCAATTTGGTCATACGCTCGTGGAAATGGAATTAGCCATTC
AACGACTTGCAGACCAGTTGCGTCGAATGGAAGGCGAATTAGAAACTCAGATTATTGCAAAACACGGTATTGAGCATTCT
CGTTATACAGAATTTGATCCTCTAGAGATGGATCAATACTCTTCATTGAATCAATTATCGAAATCACTTGCCGAATCTGC
ATCGGACTTAGTGGATTTCAAAAATACATTATCCGAAAAAATCAGAGATACCGAAAGTTTATTGGTACAGCAATCGCGTA
TTCAGGCCGAAATTCAAGAAGGTCTAATGCGAACTCGTCTAGTACCATTCTCTCGATTGCTACCTCGTTTACAACGAATT
GTGAGACAGACCTCTACTGCATTGGATCGACCAGCAGAGCTTTTTGTTAATAATACTGAAGGTGAGCTAGACCGGACAAT
GCTAGAGCGTTTGGTTACACCGCTTGAGCACATGCTTCGAAATGCAATTGACCATGGTCTAGAAGATCGTGTGCAACGTG
AACAAGCACAAAAACCAGAAACTGGACGTATTGAACTAAATATTCACCGTCAAGGTACGGATGTTGTTGTTACGTTTAAA
GATGATGGTCGAGGTATTGATATTGAGAAGGTTCGTCAAAAGGCCCTCTTATCTGGTTTGATTAATTCTGAACAAGTCTT
AGAACATCAAGATATTTTGCAGTTGATTTTCCATCCAGGGTTAAGTACGGCCGATCAAGTCACTCAGATTTCAGGTCGTG
GTGTAGGACTTGATGTTGTACAAAGTGATATTAAAGCTTTGGGCGGACATGTGAGTGTTGACTCTGTTTATGGGCAAGGA
ACAATCTTTACCATACGTGTTCCAACCACAGTAGCTGTTAGTGATGCATTGATGGTTAAAGTTGCTGATCAACAATTTGC
AATTCCGTTGGCTCAAATCGATCGAATTGTTCGAGTTTCACCAACTTCATTAGAACAGTATTTTGGAAGTGCACAAGAAT
TCTTTGAATTTGAAAATAAACGCTATCCATTACGCTATTTATCTGAGTTTGTTGGTAATCAACCGATTCCACGTTTAAGT
GGGATGATGTATTCGCTACCAGTATTAATGATTAAGGCCAATAATGGACAAACCATTGCATTATTGGTTGATCAGCTTAT
TGGTTCACGAGCGCAGATTGTAGTTAAGCCAATCGGGCAGCAGTTCTCTAGTATTGGTGCGATTGCAGGTGCAACTATTT
TAGGTGATGGTCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACTCGTCGACATAAGTCG
CTCAATGAGACTGTCTATAGACAACGCGAGTCTGACGAACGCCGTCTCATTATGATTGTAGATGACTCTGTTACAGTTCG
TAAGGTAACGACTCGTTTACTCGAACGCCAAGGCTATGACGTAGTCACAGCTAAAGATGGTATTGATGCAATTGAGCAGT
TGGAAAATATTAAACCAGATCTGATGTTGCTTGATATTGAAATGCCACGAATGGATGGTTTTGAGGTACTTAACCTCGTA
CGACATCATGATCTACATCAACATATGCCAGTCATTATGATTACATCAAGAACTGGCGAAAAACACCGTGAACGAGCATT
TGCTTTAGGGGTTAGCCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCTTTTTTCACGA
CACGTGAAGAGGAACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.045

100

0.795