Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   MJX77_RS07875 Genome accession   NZ_CP092454
Coordinates   1638310..1639194 (+) Length   294 a.a.
NCBI ID   WP_252061122.1    Uniprot ID   -
Organism   Acinetobacter sp. AHP123     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1633310..1644194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJX77_RS07850 - 1633623..1634870 (-) 1248 WP_016140126.1 YihY family inner membrane protein -
  MJX77_RS07855 wrbA 1635231..1635839 (+) 609 WP_252061118.1 NAD(P)H:quinone oxidoreductase -
  MJX77_RS07860 - 1635887..1636462 (-) 576 WP_252061120.1 xanthine phosphoribosyltransferase -
  MJX77_RS07865 - 1636534..1637247 (-) 714 WP_252061121.1 DUF3108 domain-containing protein -
  MJX77_RS07870 - 1637406..1638077 (-) 672 WP_004789576.1 hypothetical protein -
  MJX77_RS07875 tonB2 1638310..1639194 (+) 885 WP_252061122.1 TonB family protein Machinery gene
  MJX77_RS07880 ybeY 1639295..1639777 (-) 483 WP_004789571.1 rRNA maturation RNase YbeY -
  MJX77_RS07885 - 1639787..1640875 (-) 1089 WP_004789570.1 PhoH family protein -
  MJX77_RS07890 miaB 1640913..1642364 (-) 1452 WP_005301343.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33588.05 Da        Isoelectric Point: 9.1627

>NTDB_id=657730 MJX77_RS07875 WP_252061122.1 1638310..1639194(+) (tonB2) [Acinetobacter sp. AHP123]
MLNKRSLSIEPFYHWWQDRVFIAATILAILLHVFVLLIHFAIPSPSEQSTKEIAISIRSSNEPVQQADFLAQADQQGSGT
FREAHRTSSDTPNPMPNDASTGNAELESLQKVQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRRQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAQAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=657730 MJX77_RS07875 WP_252061122.1 1638310..1639194(+) (tonB2) [Acinetobacter sp. AHP123]
ATGTTGAACAAAAGAAGTCTATCCATAGAGCCTTTTTACCATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATGTTTTTGTGTTGCTCATCCACTTTGCCATACCTAGCCCGTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGATCAAGCAATGAGCCAGTTCAGCAGGCAGACTTTTTAGCACAAGCGGACCAGCAAGGTTCGGGCACA
TTTCGAGAAGCTCACCGTACCTCTAGTGATACTCCAAATCCGATGCCTAATGATGCTTCAACTGGAAATGCAGAGTTAGA
AAGTTTACAAAAGGTTCAGCAGCAAAGAGAGCTTAAATTTGAAGAAAAAGTATTAATGACTGTTTTGAGTTGGCAAAAAC
AAGCTGATGCGAGTCAAAGGAAAAAAGAACTAGAACAATTACAAAGTCAATTTCAGGCAAAAGCTGCGATGGTTGCGAGT
CTTGAAGCACAATATTTACAACGTAGACAAGATTTTAGTCGGCAACAAAAAATCAAAACAGTAGATGGAATTCAAGCGAA
GAAAGATGCTTCGGCTGCTTATTTAGATAAGTTCCGTGAAAAAGTAGAGTTGTATGGTAATCGCTATTATCCAGAAGAAG
CCAAACAACAACAGCTAAGAGGCGAAGTCCGTTTAATGGTGATTTTGAATGCCCAAGGCGGAATACGTGCAATTCGATTA
CTTGAAAGCTCAGGGCACTCAATATTAGATGAAGCAGCTAAGTCTTCAGTACGTCGCGGCGCACCATTTGGACATTTCGA
TGCCAATATGAAAGATATTTCTGAATTACGTATTGTACGTACGTGGCGTTTCGATCCGGCTCAAGCAGAATTTGAAGTAC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.095

100

0.881