Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   MJX77_RS04010 Genome accession   NZ_CP092454
Coordinates   842923..843249 (-) Length   108 a.a.
NCBI ID   WP_002053185.1    Uniprot ID   A0A0A7XV72
Organism   Acinetobacter sp. AHP123     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 837923..848249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJX77_RS03990 - 838026..838655 (-) 630 WP_199987934.1 FHA domain-containing protein -
  MJX77_RS03995 gspD 838696..840969 (-) 2274 WP_252060596.1 type II secretion system secretin GspD -
  MJX77_RS04000 - 841011..841847 (-) 837 WP_005301713.1 type II secretion system protein N -
  MJX77_RS04005 gspN 841847..842590 (-) 744 WP_005301710.1 type II secretion system protein N -
  MJX77_RS04010 hns 842923..843249 (-) 327 WP_002053185.1 H-NS histone family protein Regulator
  MJX77_RS04015 - 843444..843884 (-) 441 WP_023274336.1 thioesterase family protein -
  MJX77_RS04020 - 843892..845085 (-) 1194 WP_252060597.1 heme biosynthesis protein HemY -
  MJX77_RS04025 - 845095..845937 (-) 843 WP_252060598.1 hypothetical protein -
  MJX77_RS04030 - 845946..846713 (-) 768 WP_252060599.1 uroporphyrinogen-III synthase -
  MJX77_RS04035 hemC 846717..847634 (-) 918 WP_252060600.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12478.12 Da        Isoelectric Point: 5.0524

>NTDB_id=657711 MJX77_RS04010 WP_002053185.1 842923..843249(-) (hns) [Acinetobacter sp. AHP123]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNSE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=657711 MJX77_RS04010 WP_002053185.1 842923..843249(-) (hns) [Acinetobacter sp. AHP123]
ATGAAACCGGATATCAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCGGAAGCTTTAATTGCAAGTAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATCGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTTGAGCCACGTTACCGCAACAAAAACAATTCTGAA
GAGACTTGGACTGGCCGTGGTAAACAACCACGCTGGTTAGTTGCTGAAATTGAAAAAGGCGCAAAACTTGAAGATTTCTT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A7XV72

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

99.074

100

0.991