Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   MJX77_RS03490 Genome accession   NZ_CP092454
Coordinates   730197..732425 (+) Length   742 a.a.
NCBI ID   WP_252060563.1    Uniprot ID   -
Organism   Acinetobacter sp. AHP123     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 725197..737425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJX77_RS03460 lnt 725222..726781 (+) 1560 WP_250374839.1 apolipoprotein N-acyltransferase -
  MJX77_RS03465 - 726783..727121 (-) 339 WP_111855598.1 tRNA-binding protein -
  MJX77_RS03470 - 727365..727625 (+) 261 WP_252060561.1 DUF2798 domain-containing protein -
  MJX77_RS03475 - 727690..728034 (-) 345 WP_252060562.1 hypothetical protein -
  MJX77_RS03480 gspG 728304..728819 (-) 516 WP_107880652.1 type II secretion system major pseudopilin GspG -
  MJX77_RS03485 gspF 728843..730048 (-) 1206 WP_005301929.1 type II secretion system inner membrane protein GspF -
  MJX77_RS03490 priA 730197..732425 (+) 2229 WP_252060563.1 primosomal protein N' Machinery gene
  MJX77_RS03495 - 732502..734346 (+) 1845 WP_252060564.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  MJX77_RS03500 hslO 734510..735385 (+) 876 WP_005301920.1 Hsp33 family molecular chaperone HslO -
  MJX77_RS03505 - 735521..736132 (+) 612 WP_252060565.1 LysE family translocator -
  MJX77_RS03510 - 736279..737235 (+) 957 WP_013199061.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84072.01 Da        Isoelectric Point: 8.7607

>NTDB_id=657708 MJX77_RS03490 WP_252060563.1 730197..732425(+) (priA) [Acinetobacter sp. AHP123]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQSLIGIITEKVNPHEPFTGKFQLKAISELL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPTPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQSCPVILGSATPSIDSYYLVETGKLTALQLNKRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKHTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTI
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLQFLNEAAEQLRQIAGEIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=657708 MJX77_RS03490 WP_252060563.1 730197..732425(+) (priA) [Acinetobacter sp. AHP123]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCGCAATATGAACGGGCTCACGTAGGCTCACGCGTCGCTATTTCATTTGGACGCCAAAGCTTAA
TTGGCATCATTACAGAAAAAGTAAATCCACATGAGCCATTTACAGGCAAATTTCAGCTTAAAGCCATTTCTGAACTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCCGCACAATATTACCAATTTCCAATTGGTGA
GGTCATGCAAACCGCCCTACCCGCGTTATTGCGTCAGGGCAAACCGATGGATGTCTTGTTCCATCTTTGGAAAATCACAC
CCTGTGACAATGTTGAAGCCCTACTAAAGCGTTCTGTTAAGCAACAAGATGCTTATCAAATTTTAAAATTACATCCTGCC
GGAACTACAGAAAATATTCTCAATTTAAGTGGTGTAGAAACAGCAACACTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGCACGCTCGAACCACATGACTTTAGCCCCACACCTGTTCAATTGGCACAAATGCCGCTCACGCTCAATGAAGACCAAA
AGAAAGCAACTCAGCACGTCGTAAATGCACAGCATCAATACCAAGCCTTTTTGCTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAGGTGCTAAAGCAAGGTAAACAAGTATTGGTGTTAGTACCTGAAATTGGTTT
AACCCCTCAAACGATTTCACGTTTTAAGTCTCGTTTTAACTGTGATATTGCTTTATTGCACTCTGGCTTAAATGACTCCA
AACGCCTACAAGCATGGCAACAGGCACAGACCGGAAAAGCGTCTATTATTTTAGGAACACGCTCTGCCATCTATACACCC
CTGCCACGTTTAGGCCTCATCATTTTAGATGAAGAACACGACCTGTCTTATAAACAGCAGGAAGGCTTCCGATATCATGC
GCGTGATGTCGCACTCTACCGCGGTCACTTGCAAAGCTGCCCTGTTATTTTAGGTTCAGCAACGCCAAGTATTGATAGTT
ATTATTTGGTCGAAACTGGCAAATTAACTGCACTGCAACTCAACAAACGTGCTGGACATGCACTTTTGCCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATCAGCCAGCCCCTTATTGAACAAATCAAACATACATTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTTTGTGAAAGCTGTGGATGGCAAGCAA
ATTGCCCGCATTGCGACGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCATCACTGCGGAACCATT
CATCGCTTACCCGATCATTGCCCTGAATGTCAGCAAAAAAGCTTAAAAACTTTAGGTGCAGGAACCGCTAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGATCATGATGTCATTCGGGTCGATCGTGACAGTACCAGTCGTGTCGGAAGCTGGCAAA
AAATCTATGACCGTATTCATCAAAACAAACCAACAATTTTACTCGGCACTCAAATGTTGGCAAAAGGCCATCATTTTCCA
CATGTCACATTAGTTGCCATTTTAGATATTGATGCAGGTTTACTCAGTGTAGACATCCGTGCGCCAGAACGTACGGCGCA
GCTGATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACACAAAGGCCATGTTTATTTACAAACATTAAGACCTGACC
ATCCATTACTCACCACGCTCATTGAAAAAGATTATCGCGCAGTTGCCAAACAAACGCTGGCTGAACGTAAAGTAGCTTTG
CTGCCACCTTATCGCTATGCAGTACTAATACGTGCAGAATCTAAAGATCGTGACTATACCTTACAATTTTTAAATGAAGC
AGCCGAGCAACTTCGTCAAATCGCTGGTGAAATTGTTGATATTTGGGGACCTATTCCAGCGCCAATGGAACGTAAAGCGG
GACGCTACCGTGCCCACATGGTGATTTTATCTGCTGACCGTGCTCGCCTACATTTTTACTTAAGACAATGGTGGTCTCAA
TTGGTTCATGCACCAAGACAGCATCAACTCAGGCTATCAATTGATGTCGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.035

100

0.97