Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LXM97_RS12825 Genome accession   NZ_CP092447
Coordinates   2624599..2625264 (-) Length   221 a.a.
NCBI ID   WP_000697884.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SYN     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2619599..2630264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXM97_RS12805 (LXM97_12805) - 2620059..2620172 (-) 114 WP_078065157.1 hypothetical protein -
  LXM97_RS12810 (LXM97_12810) - 2620841..2622841 (-) 2001 WP_000776726.1 ABC transporter permease -
  LXM97_RS12815 (LXM97_12815) - 2622838..2623593 (-) 756 WP_000923775.1 ABC transporter ATP-binding protein -
  LXM97_RS12820 (LXM97_12820) braS 2623701..2624588 (-) 888 WP_000143422.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  LXM97_RS12825 (LXM97_12825) braR 2624599..2625264 (-) 666 WP_000697884.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  LXM97_RS12830 (LXM97_12830) - 2625290..2625490 (-) 201 WP_000604725.1 hypothetical protein -
  LXM97_RS12835 (LXM97_12835) - 2625688..2627112 (+) 1425 WP_000953738.1 alkaline phosphatase -
  LXM97_RS12840 (LXM97_12840) - 2627182..2627292 (+) 111 WP_001791296.1 hypothetical protein -
  LXM97_RS12845 (LXM97_12845) - 2627395..2627850 (-) 456 WP_000106183.1 MarR family winged helix-turn-helix transcriptional regulator -
  LXM97_RS12850 (LXM97_12850) - 2628095..2628856 (-) 762 WP_239794927.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25406.50 Da        Isoelectric Point: 4.7961

>NTDB_id=657655 LXM97_RS12825 WP_000697884.1 2624599..2625264(-) (braR) [Staphylococcus aureus strain SYN]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=657655 LXM97_RS12825 WP_000697884.1 2624599..2625264(-) (braR) [Staphylococcus aureus strain SYN]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAATTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991