Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHB53_RS22450 Genome accession   NZ_CP108258
Coordinates   4940369..4941493 (+) Length   374 a.a.
NCBI ID   WP_266673013.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00056     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4935369..4946493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHB53_RS22435 (OHB53_22380) - 4935915..4936844 (+) 930 WP_266673019.1 hypothetical protein -
  OHB53_RS22440 (OHB53_22385) - 4936877..4938592 (-) 1716 WP_266673017.1 BACON domain-containing protein -
  OHB53_RS22445 (OHB53_22390) radA/sms 4938847..4940256 (+) 1410 WP_266673015.1 DNA repair protein RadA Machinery gene
  OHB53_RS22450 (OHB53_22395) disA 4940369..4941493 (+) 1125 WP_266673013.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHB53_RS22455 (OHB53_22400) - 4942257..4943051 (-) 795 WP_266673012.1 hypothetical protein -
  OHB53_RS22460 (OHB53_22405) - 4943237..4943878 (+) 642 WP_266673011.1 phosphatase PAP2 family protein -
  OHB53_RS22465 (OHB53_22410) - 4943879..4944526 (-) 648 WP_266673010.1 response regulator transcription factor -
  OHB53_RS22470 (OHB53_22415) - 4944523..4946124 (-) 1602 WP_266673008.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40341.21 Da        Isoelectric Point: 4.9304

>NTDB_id=657471 OHB53_RS22450 WP_266673013.1 4940369..4941493(+) (disA) [Streptomyces sp. NBC_00056]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELDALTHAELLELPTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=657471 OHB53_RS22450 WP_266673013.1 4940369..4941493(+) (disA) [Streptomyces sp. NBC_00056]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGCAAGTCCGGCGGGAGCTCCGGTGCCGATGGGCTGATGCGCGCCTCACT
GAGCGCGGTCGCGCCCGGTACGGCGCTGCGTGACGGCCTCGAGCGAATCCTCCGCGGCAACACCGGCGGACTCATCGTTC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGTTTCATCCTGGACGTCGAGTTCACCGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGTTGGTGCC
CGACCCCACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCAGCTTCCCCG
TGGTCTCGGTGTCGCAGTCGATGCGGCTCATCGCCCTCTACGTGGACGGGCAGCGGCGCGTCCTCGAGGACTCGGCCGCG
ATTCTCTCGCGGGCGAATCAGGCGCTGGCCACTCTTGAGCGGTACAAGCTCCGCTTGGACGAGGTGGCCGGGACACTCTC
CGCGCTCGAGATCGAGGATCTCGTGACCGTGCGGGATGTGACCGCGGTCGCGCAGCGGCTGGAAATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACGGATGGGCGACTGCTCGCCCTTCAGCTCGACGAGTTGATCGCC
GGGGTGGAGCCCGAGCGGGAGCTCGTCGTTCGGGACTACGTGCCCGAACCCACGGCCAAGCGGTCCCGGACCGTCGACGA
GGCCCTGTTCGAACTCGACGCGCTGACGCATGCCGAGCTTCTCGAACTGCCCACTGTGGCACGCGCGTTGGGGTACACCG
GGTCTCCGGAGACCCTGGACTCGGCCGTTTCGCCTCGTGGGTTCCGGCTGTTGGCGAAGGTGCCTCGGCTGCCCGGGGCC
ATCATTGAGCGGCTTGTCGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCCAGCGTCGACGATCTGCAGACCGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGGAGCGTGCGGGAAGGACTCTCACGGTTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433