Detailed information NTG0065735

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: TSP02S_RS00685
• Genome accession: NZ_AP014510
• Coordinates: 148119..149003 (+)
• Length: 294 a.a.
• NCBI ID: WP_041081135.1
• Uniprot ID: -
• Organism: Thermotoga profunda AZM34c06
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 143119..154003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TSP02S_RS00675	-	144277..146301 (-)	2025	WP_041081133.1	HD domain-containing phosphohydrolase	-
TSP02S_RS00680	-	146388..148115 (+)	1728	WP_041081134.1	proline--tRNA ligase	-
TSP02S_RS00685	pilA	148119..149003 (+)	885	WP_041081135.1	signal recognition particle-docking protein FtsY	Machinery gene
TSP02S_RS00690	-	149005..150024 (-)	1020	WP_041081136.1	DUF2804 domain-containing protein	-
TSP02S_RS00695	-	150021..150884 (-)	864	WP_041081137.1	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	-
TSP02S_RS00700	sdaAB	150905..151558 (-)	654	WP_041081138.1	L-serine ammonia-lyase, iron-sulfur-dependent subunit beta	-
TSP02S_RS00705	-	151568..152578 (-)	1011	WP_041081139.1	6-phosphofructokinase	-

Sequence

Protein

• Length: 294 a.a.
• Molecular weight: 32104.08 Da
• Isoelectric Point: 6.8532

>NTDB_id=65735 TSP02S_RS00685 WP_041081135.1 148119..149003(+) (pilA) [Thermotoga profunda AZM34c06]
MGFFEKLKAGLSKARKTFFEGLSQLLKGKRISNEILEELEERLIAADVGYETTHYILEKLKQIQTDDAYNALKEILIELL
SNGNEIDLKSHSPFVITIVGVNGTGKTTTAAKLGAYFQSLGKTVVLGAADTFRAAAIEQLEEWGRRIGCTVISHNEGADS
AAVAFDTVNHAKARQKDIVIIDTAGRLHTKKNLMEELRKVHRVINKVVEGAPHEVLLVIDATTGQNGLVQARIFKEMVNV
TGVVITKLDGTAKGGIALAIKKELGLPIKFIGIGEDVEDLRPFNAKEFVDALLD

Nucleotide

• Length: 885 bp

>NTDB_id=65735 TSP02S_RS00685 WP_041081135.1 148119..149003(+) (pilA) [Thermotoga profunda AZM34c06]
ATGGGATTTTTCGAAAAACTAAAAGCAGGACTTTCAAAGGCAAGAAAGACATTTTTTGAAGGTCTCTCACAACTGTTAAA
AGGTAAAAGAATAAGTAATGAGATACTTGAAGAACTCGAAGAGAGATTGATAGCAGCAGATGTGGGATATGAAACAACGC
ATTATATACTTGAAAAACTAAAACAAATTCAAACAGATGACGCATACAATGCACTCAAGGAAATTCTCATAGAACTTCTT
TCAAATGGCAACGAAATCGACTTGAAATCACATTCGCCATTTGTAATAACAATCGTTGGAGTCAACGGTACTGGGAAAAC
CACAACCGCGGCAAAGTTAGGTGCGTATTTTCAATCACTTGGAAAAACAGTTGTTCTTGGGGCGGCAGATACCTTCAGGG
CTGCCGCGATTGAACAACTGGAAGAGTGGGGACGCAGAATTGGATGTACTGTGATAAGCCACAACGAAGGTGCAGATTCA
GCAGCAGTTGCATTTGACACAGTCAATCATGCAAAAGCAAGACAAAAAGACATAGTAATAATCGACACTGCTGGAAGGTT
ACATACAAAGAAAAATCTCATGGAAGAATTGAGAAAGGTCCACAGAGTTATCAATAAAGTCGTCGAAGGAGCACCACATG
AGGTTCTCTTGGTGATAGATGCAACCACAGGGCAAAATGGACTTGTACAAGCCAGGATTTTCAAAGAAATGGTCAATGTA
ACTGGTGTCGTGATAACCAAACTTGATGGCACAGCGAAAGGTGGTATAGCTCTGGCTATCAAAAAAGAACTCGGTCTTCC
AATAAAATTCATAGGAATTGGAGAAGACGTTGAAGATCTCAGACCCTTCAACGCAAAAGAATTCGTAGATGCTCTCTTAG
ATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (19-63)

• SRP54-type protein, GTPase domain (SRP54) (93-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.525	100	0.49