Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H7K53_RS13730 Genome accession   NZ_AP022077
Coordinates   2804320..2805261 (-) Length   313 a.a.
NCBI ID   WP_004739507.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain WP4-W18-ESBL-11     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2799320..2810261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7K53_RS13715 (WP4W18E11_26940) bauB 2801631..2802599 (-) 969 WP_004739503.1 siderophore-binding periplasmic lipoprotein BauB -
  H7K53_RS13720 (WP4W18E11_26950) bauE 2802606..2803376 (-) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  H7K53_RS13725 (WP4W18E11_26960) bauC 2803373..2804320 (-) 948 WP_004739506.1 ferric acinetobactin ABC transporter permease subunit BauC -
  H7K53_RS13730 (WP4W18E11_26970) ceuB 2804320..2805261 (-) 942 WP_004739507.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  H7K53_RS13735 (WP4W18E11_26990) basB 2805894..2807921 (+) 2028 WP_109104317.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  H7K53_RS13740 (WP4W18E11_27000) basA 2807992..2809839 (-) 1848 WP_004739512.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33894.97 Da        Isoelectric Point: 8.1466

>NTDB_id=65730 H7K53_RS13730 WP_004739507.1 2804320..2805261(-) (ceuB) [Acinetobacter baumannii strain WP4-W18-ESBL-11]
MQFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHCFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=65730 H7K53_RS13730 WP_004739507.1 2804320..2805261(-) (ceuB) [Acinetobacter baumannii strain WP4-W18-ESBL-11]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGTTCGTTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATTACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGTTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCATTATGAAGTCATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACATTGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTAGTTTGCGACATTCTTGGTCGCTCCATTATTTATCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422

Multiple sequence alignment