Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   MID02_RS01795 Genome accession   NZ_CP092383
Coordinates   341047..341211 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain SF327     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 336047..346211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MID02_RS01790 (MID02_01790) srfAB 337938..341030 (+) 3093 Protein_311 surfactin non-ribosomal peptide synthetase SrfAB -
  MID02_RS01795 (MID02_01795) comS 341047..341211 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=657004 MID02_RS01795 WP_269195014.1 341047..341211(+) (comS) [Bacillus velezensis strain SF327]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=657004 MID02_RS01795 WP_269195014.1 341047..341211(+) (comS) [Bacillus velezensis strain SF327]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5