Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MID01_RS07505 Genome accession   NZ_CP092369
Coordinates   1438865..1439329 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain ZW     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1433865..1444329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MID01_RS07485 (MID01_07485) kinA 1434332..1436152 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  MID01_RS07490 (MID01_07490) dapX 1436162..1437343 (-) 1182 WP_041850887.1 aminotransferase A -
  MID01_RS07495 (MID01_07495) - 1437545..1437706 (-) 162 WP_014476654.1 hypothetical protein -
  MID01_RS07500 (MID01_07500) cheV 1437910..1438821 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  MID01_RS07505 (MID01_07505) kre 1438865..1439329 (-) 465 WP_003232406.1 YkyB family protein Regulator
  MID01_RS07510 (MID01_07510) ykuC 1439455..1440747 (-) 1293 WP_014479656.1 MFS transporter -
  MID01_RS07515 (MID01_07515) ltdD 1440823..1441317 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  MID01_RS07520 (MID01_07520) ppeE 1441374..1442234 (-) 861 WP_041850886.1 metallophosphoesterase -
  MID01_RS07525 (MID01_07525) fadH 1442377..1443141 (+) 765 WP_041850885.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=656840 MID01_RS07505 WP_003232406.1 1438865..1439329(-) (kre) [Bacillus subtilis strain ZW]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=656840 MID01_RS07505 WP_003232406.1 1438865..1439329(-) (kre) [Bacillus subtilis strain ZW]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1