Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MIS45_RS05670 Genome accession   NZ_CP092361
Coordinates   1146784..1147233 (+) Length   149 a.a.
NCBI ID   WP_249441817.1    Uniprot ID   -
Organism   Wielerella bovis strain CCUG 44465     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1141784..1152233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MIS45_RS05645 (MIS45_05645) mglC 1142058..1143068 (+) 1011 WP_249451309.1 galactose/methyl galactoside ABC transporter permease MglC -
  MIS45_RS05650 (MIS45_05650) pyrB 1143465..1144385 (+) 921 WP_249445042.1 aspartate carbamoyltransferase -
  MIS45_RS05655 (MIS45_05655) pyrI 1144395..1144853 (+) 459 WP_249451345.1 aspartate carbamoyltransferase regulatory subunit -
  MIS45_RS05660 (MIS45_05660) fabI 1145018..1145809 (+) 792 WP_249446224.1 enoyl-ACP reductase FabI -
  MIS45_RS05665 (MIS45_05665) - 1145900..1146604 (+) 705 WP_249451310.1 phosphoglycolate phosphatase -
  MIS45_RS05670 (MIS45_05670) recX 1146784..1147233 (+) 450 WP_249441817.1 recombination regulator RecX Regulator
  MIS45_RS05675 (MIS45_05675) - 1147428..1148345 (+) 918 WP_249449816.1 tetratricopeptide repeat protein -
  MIS45_RS05680 (MIS45_05680) - 1148502..1149617 (+) 1116 WP_249449817.1 pseudouridine synthase -
  MIS45_RS05685 (MIS45_05685) - 1149653..1150273 (+) 621 WP_249449818.1 GDSL-type esterase/lipase family protein -
  MIS45_RS05690 (MIS45_05690) msrA 1150347..1151288 (-) 942 Protein_1096 peptide-methionine (S)-S-oxide reductase MsrA -
  MIS45_RS05695 (MIS45_05695) yfaE 1151583..1151903 (-) 321 WP_249449819.1 class I ribonucleotide reductase maintenance protein YfaE -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17522.75 Da        Isoelectric Point: 5.4092

>NTDB_id=656773 MIS45_RS05670 WP_249441817.1 1146784..1147233(+) (recX) [Wielerella bovis strain CCUG 44465]
MKPQKSLRARAMDIVSRREVSRLELQRKLAPYAEDADELESVLNEFAAQNWQSDERYVEAFINSKSRKHGAMRLRQELAS
KGVDEDLVCEYLPDEETERENAAHVLRKKFKQPAADYAEKQKQIRFLLYRGFDMDTIHAVMKTAWDEEE

Nucleotide


Download         Length: 450 bp        

>NTDB_id=656773 MIS45_RS05670 WP_249441817.1 1146784..1147233(+) (recX) [Wielerella bovis strain CCUG 44465]
ATGAAACCACAAAAATCCCTACGCGCCCGCGCGATGGACATTGTCTCGCGCCGCGAAGTCAGCCGCTTGGAATTGCAACG
CAAACTCGCGCCTTATGCCGAAGATGCCGATGAATTAGAATCGGTGTTGAACGAATTTGCCGCGCAAAATTGGCAATCCG
ATGAACGCTATGTAGAAGCATTTATTAACAGCAAAAGCCGCAAACATGGCGCGATGCGTTTGAGACAAGAACTTGCCAGC
AAAGGCGTGGACGAAGATTTGGTGTGCGAATATTTGCCTGATGAGGAAACCGAACGCGAAAATGCGGCACACGTTTTGCG
CAAAAAATTCAAGCAGCCTGCGGCAGATTATGCGGAAAAACAAAAGCAAATCCGCTTTTTGCTGTATCGCGGCTTTGATA
TGGATACGATTCATGCGGTGATGAAAACCGCGTGGGACGAAGAAGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

65.986

98.658

0.651