Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MIS31_RS07135 Genome accession   NZ_CP092360
Coordinates   1375256..1375705 (-) Length   149 a.a.
NCBI ID   WP_249446221.1    Uniprot ID   -
Organism   Wielerella bovis strain 07LB258     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1370256..1380705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MIS31_RS07110 (MIS31_07110) yfaE 1371128..1371448 (+) 321 WP_249441821.1 class I ribonucleotide reductase maintenance protein YfaE -
  MIS31_RS07115 (MIS31_07115) msrA 1371743..1372684 (+) 942 Protein_1374 peptide-methionine (S)-S-oxide reductase MsrA -
  MIS31_RS07120 (MIS31_07120) - 1372758..1373378 (-) 621 WP_249445050.1 GDSL-type esterase/lipase family protein -
  MIS31_RS07125 (MIS31_07125) - 1373417..1374439 (-) 1023 WP_249446218.1 pseudouridine synthase -
  MIS31_RS07130 (MIS31_07130) - 1374390..1375064 (-) 675 WP_249446219.1 tetratricopeptide repeat protein -
  MIS31_RS07135 (MIS31_07135) recX 1375256..1375705 (-) 450 WP_249446221.1 recombination regulator RecX Regulator
  MIS31_RS07140 (MIS31_07140) - 1375897..1376601 (-) 705 WP_249446222.1 phosphoglycolate phosphatase -
  MIS31_RS07145 (MIS31_07145) fabI 1376692..1377483 (-) 792 WP_249446224.1 enoyl-ACP reductase FabI -
  MIS31_RS07150 (MIS31_07150) pyrI 1377653..1378111 (-) 459 WP_249447714.1 aspartate carbamoyltransferase regulatory subunit -
  MIS31_RS07155 (MIS31_07155) pyrB 1378121..1379041 (-) 921 WP_249445042.1 aspartate carbamoyltransferase -
  MIS31_RS07160 (MIS31_07160) mglC 1379334..1380344 (-) 1011 WP_249446225.1 galactose/methyl galactoside ABC transporter permease MglC -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17636.92 Da        Isoelectric Point: 5.4399

>NTDB_id=656751 MIS31_RS07135 WP_249446221.1 1375256..1375705(-) (recX) [Wielerella bovis strain 07LB258]
MKPQKSLRVRAMEIVSRREISRLELQRKLAPYAEDTDELEAVLNEFAAQNWQSDERYVEAFINSKSRKHGAMRLRQELAS
KGVDEDLVREYLPDEETERENAAQVLRKKFKQPAADYAEKQKQIRFLLYRGFDMDTIHAVMKTAWDEEE

Nucleotide


Download         Length: 450 bp        

>NTDB_id=656751 MIS31_RS07135 WP_249446221.1 1375256..1375705(-) (recX) [Wielerella bovis strain 07LB258]
ATGAAACCACAAAAATCCCTACGAGTGCGGGCGATGGAGATTGTGTCGCGCCGCGAAATCAGCCGCTTGGAATTACAACG
CAAACTCGCGCCTTACGCCGAAGATACCGATGAACTAGAAGCGGTGTTGAACGAATTTGCCGCGCAAAATTGGCAATCCG
ATGAACGCTATGTAGAAGCATTTATCAACAGCAAAAGCCGCAAGCATGGCGCGATGCGTTTGAGACAAGAACTTGCCAGC
AAAGGCGTGGACGAAGATTTGGTGCGAGAATATTTGCCCGATGAGGAAACCGAACGCGAAAATGCAGCCCAAGTGTTGCG
CAAAAAATTCAAGCAGCCTGCGGCAGATTATGCGGAAAAACAAAAGCAAATCCGCTTTTTGCTGTATCGCGGCTTTGATA
TGGATACGATTCATGCGGTGATGAAAACCGCGTGGGACGAAGAAGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

64.626

98.658

0.638