Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MIS33_RS06300 Genome accession   NZ_CP092359
Coordinates   1269902..1270351 (+) Length   149 a.a.
NCBI ID   WP_249446221.1    Uniprot ID   -
Organism   Wielerella bovis strain 08LB461     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1264902..1275351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MIS33_RS06275 (MIS33_06275) mglC 1265263..1266273 (+) 1011 WP_249446225.1 galactose/methyl galactoside ABC transporter permease MglC -
  MIS33_RS06280 (MIS33_06280) pyrB 1266566..1267486 (+) 921 WP_249445042.1 aspartate carbamoyltransferase -
  MIS33_RS06285 (MIS33_06285) pyrI 1267496..1267954 (+) 459 WP_249447714.1 aspartate carbamoyltransferase regulatory subunit -
  MIS33_RS06290 (MIS33_06290) fabI 1268124..1268915 (+) 792 WP_249446224.1 enoyl-ACP reductase FabI -
  MIS33_RS06295 (MIS33_06295) - 1269006..1269710 (+) 705 WP_249446222.1 phosphoglycolate phosphatase -
  MIS33_RS06300 (MIS33_06300) recX 1269902..1270351 (+) 450 WP_249446221.1 recombination regulator RecX Regulator
  MIS33_RS06305 (MIS33_06305) - 1270543..1271460 (+) 918 WP_249451402.1 tetratricopeptide repeat protein -
  MIS33_RS06310 (MIS33_06310) - 1271616..1272731 (+) 1116 WP_249451403.1 pseudouridine synthase -
  MIS33_RS06315 (MIS33_06315) - 1272770..1273390 (+) 621 WP_249445050.1 GDSL-type esterase/lipase family protein -
  MIS33_RS06320 (MIS33_06320) msrA 1273464..1274405 (-) 942 Protein_1216 peptide-methionine (S)-S-oxide reductase MsrA -
  MIS33_RS06325 (MIS33_06325) yfaE 1274700..1275020 (-) 321 WP_249441821.1 class I ribonucleotide reductase maintenance protein YfaE -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17636.92 Da        Isoelectric Point: 5.4399

>NTDB_id=656722 MIS33_RS06300 WP_249446221.1 1269902..1270351(+) (recX) [Wielerella bovis strain 08LB461]
MKPQKSLRVRAMEIVSRREISRLELQRKLAPYAEDTDELEAVLNEFAAQNWQSDERYVEAFINSKSRKHGAMRLRQELAS
KGVDEDLVREYLPDEETERENAAQVLRKKFKQPAADYAEKQKQIRFLLYRGFDMDTIHAVMKTAWDEEE

Nucleotide


Download         Length: 450 bp        

>NTDB_id=656722 MIS33_RS06300 WP_249446221.1 1269902..1270351(+) (recX) [Wielerella bovis strain 08LB461]
ATGAAACCACAAAAATCCCTACGAGTGCGGGCGATGGAGATTGTGTCGCGCCGCGAAATCAGCCGCTTGGAATTACAACG
CAAACTCGCGCCTTACGCCGAAGATACCGATGAACTAGAAGCGGTGTTGAACGAATTTGCCGCGCAAAATTGGCAATCCG
ATGAACGCTATGTAGAAGCATTTATCAACAGCAAAAGCCGCAAGCATGGCGCGATGCGTTTGAGACAAGAACTTGCCAGC
AAAGGCGTGGACGAAGATTTGGTGCGAGAATATTTGCCCGATGAGGAAACCGAACGCGAAAATGCAGCCCAAGTGTTGCG
CAAAAAATTCAAGCAGCCTGCGGCAGATTATGCGGAAAAACAAAAGCAAATCCGCTTTTTGCTGTATCGCGGCTTTGATA
TGGATACGATTCATGCGGTGATGAAAACCGCGTGGGACGAAGAAGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

64.626

98.658

0.638