Detailed information NTG0065672

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R28_RS24025
• Genome accession: NZ_AP022069
• Coordinates: 5038284..5039309 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WP4-W18-ESBL-09
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5033284..5044309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R28_RS24015 (WP4W18E09_46530)	rpmE	5035515..5035727 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R28_RS24020 (WP4W18E09_46540)	priA	5035930..5038128 (+)	2199	WP_001590975.1	primosomal protein N'	Machinery gene
H7R28_RS24025 (WP4W18E09_46550)	cytR	5038284..5039309 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
H7R28_RS24030 (WP4W18E09_46560)	ftsN	5039401..5040360 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7R28_RS24035 (WP4W18E09_46570)	hslV	5040453..5040983 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R28_RS24040 (WP4W18E09_46580)	hslU	5040993..5042324 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7R28_RS24045 (WP4W18E09_46590)	menA	5042391..5043317 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R28_RS24050 (WP4W18E09_46600)	rraA	5043410..5043895 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R28_RS24055 (WP4W18E09_46610)	zapB	5043980..5044225 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=65672 H7R28_RS24025 WP_000644904.1 5038284..5039309(+) (cytR) [Escherichia coli strain WP4-W18-ESBL-09]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=65672 H7R28_RS24025 WP_000644904.1 5038284..5039309(+) (cytR) [Escherichia coli strain WP4-W18-ESBL-09]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628