Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MIS46_RS06510 Genome accession   NZ_CP092358
Coordinates   1292128..1292577 (+) Length   149 a.a.
NCBI ID   WP_249441817.1    Uniprot ID   -
Organism   Wielerella bovis strain 09LB414     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1287128..1297577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MIS46_RS06485 (MIS46_06485) pyrB 1288138..1289058 (+) 921 WP_249441813.1 aspartate carbamoyltransferase -
  MIS46_RS06490 (MIS46_06490) pyrI 1289068..1289526 (+) 459 WP_249443804.1 aspartate carbamoyltransferase regulatory subunit -
  MIS46_RS06495 (MIS46_06495) fabI 1289691..1290482 (+) 792 WP_249441814.1 enoyl-ACP reductase FabI -
  MIS46_RS06500 (MIS46_06500) - 1290562..1291197 (+) 636 WP_249441815.1 LysE family translocator -
  MIS46_RS06505 (MIS46_06505) - 1291244..1291948 (+) 705 WP_249441816.1 phosphoglycolate phosphatase -
  MIS46_RS06510 (MIS46_06510) recX 1292128..1292577 (+) 450 WP_249441817.1 recombination regulator RecX Regulator
  MIS46_RS06515 (MIS46_06515) - 1292772..1293689 (+) 918 WP_249441818.1 tetratricopeptide repeat protein -
  MIS46_RS06520 (MIS46_06520) - 1293847..1294962 (+) 1116 WP_249441819.1 pseudouridine synthase -
  MIS46_RS06525 (MIS46_06525) - 1294998..1295594 (+) 597 WP_249441820.1 GDSL-type esterase/lipase family protein -
  MIS46_RS06530 (MIS46_06530) msrA 1295668..1296609 (-) 942 Protein_1262 peptide-methionine (S)-S-oxide reductase MsrA -
  MIS46_RS06535 (MIS46_06535) yfaE 1296904..1297224 (-) 321 WP_249441821.1 class I ribonucleotide reductase maintenance protein YfaE -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17522.75 Da        Isoelectric Point: 5.4092

>NTDB_id=656697 MIS46_RS06510 WP_249441817.1 1292128..1292577(+) (recX) [Wielerella bovis strain 09LB414]
MKPQKSLRARAMDIVSRREVSRLELQRKLAPYAEDADELESVLNEFAAQNWQSDERYVEAFINSKSRKHGAMRLRQELAS
KGVDEDLVCEYLPDEETERENAAHVLRKKFKQPAADYAEKQKQIRFLLYRGFDMDTIHAVMKTAWDEEE

Nucleotide


Download         Length: 450 bp        

>NTDB_id=656697 MIS46_RS06510 WP_249441817.1 1292128..1292577(+) (recX) [Wielerella bovis strain 09LB414]
ATGAAACCACAAAAATCCCTACGCGCCCGCGCGATGGACATTGTCTCGCGCCGCGAAGTCAGCCGCTTGGAATTGCAACG
CAAACTCGCGCCTTATGCCGAAGATGCCGATGAATTAGAATCGGTGTTGAACGAATTTGCCGCGCAAAATTGGCAATCCG
ATGAACGCTATGTAGAAGCATTTATTAACAGCAAAAGCCGCAAACATGGCGCGATGCGTTTGAGACAAGAACTTGCCAGC
AAAGGCGTGGACGAAGATTTGGTGTGCGAATATTTGCCTGATGAGGAAACCGAACGCGAAAATGCGGCACACGTTTTGCG
CAAAAAATTCAAGCAGCCTGCGGCAGATTATGCGGAAAAACAAAAGCAAATCCGCTTTTTGCTGTATCGCGGCTTTGATA
TGGATACGATTCATGCGGTGATGAAAACCGCGTGGGACGAAGAAGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

65.986

98.658

0.651