Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MIS44_RS07080 Genome accession   NZ_CP092357
Coordinates   1397624..1398073 (-) Length   149 a.a.
NCBI ID   WP_249448015.1    Uniprot ID   -
Organism   Wielerella bovis strain 10LB456     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1392624..1403073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MIS44_RS07055 (MIS44_07055) yfaE 1392955..1393275 (+) 321 WP_249441821.1 class I ribonucleotide reductase maintenance protein YfaE -
  MIS44_RS07060 (MIS44_07060) msrA 1393570..1394511 (+) 942 Protein_1366 peptide-methionine (S)-S-oxide reductase MsrA -
  MIS44_RS07065 (MIS44_07065) - 1394585..1395205 (-) 621 WP_249448012.1 GDSL-type esterase/lipase family protein -
  MIS44_RS07070 (MIS44_07070) - 1395243..1396358 (-) 1116 WP_249448013.1 pseudouridine synthase -
  MIS44_RS07075 (MIS44_07075) - 1396515..1397432 (-) 918 WP_249448014.1 tetratricopeptide repeat protein -
  MIS44_RS07080 (MIS44_07080) recX 1397624..1398073 (-) 450 WP_249448015.1 recombination regulator RecX Regulator
  MIS44_RS07085 (MIS44_07085) - 1398253..1398957 (-) 705 WP_249448016.1 phosphoglycolate phosphatase -
  MIS44_RS07090 (MIS44_07090) fabI 1399048..1399839 (-) 792 WP_249448017.1 enoyl-ACP reductase FabI -
  MIS44_RS07095 (MIS44_07095) pyrI 1400009..1400467 (-) 459 WP_249443804.1 aspartate carbamoyltransferase regulatory subunit -
  MIS44_RS07100 (MIS44_07100) pyrB 1400477..1401397 (-) 921 WP_249448018.1 aspartate carbamoyltransferase -
  MIS44_RS07105 (MIS44_07105) mglC 1401690..1402700 (-) 1011 WP_249441812.1 galactose/methyl galactoside ABC transporter permease MglC -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17565.84 Da        Isoelectric Point: 6.5046

>NTDB_id=656677 MIS44_RS07080 WP_249448015.1 1397624..1398073(-) (recX) [Wielerella bovis strain 10LB456]
MKPQKSLRARAMDIVSRREVSRLELQRKLAPYAEDADELESVLNEFAAQNWQSDERYVEAFINSKSRKHGAMRLRQELAS
KGVDEDLVREYLPDEETERKNAAQVLRKKFKQPAADYAEKQKQIRFLLYRGFDMDTIHAVMKTAWDEEE

Nucleotide


Download         Length: 450 bp        

>NTDB_id=656677 MIS44_RS07080 WP_249448015.1 1397624..1398073(-) (recX) [Wielerella bovis strain 10LB456]
ATGAAACCACAAAAATCCCTACGCGCCCGCGCGATGGACATTGTCTCGCGCCGCGAAGTCAGCCGCTTGGAATTGCAACG
CAAACTCGCACCTTATGCCGAAGATGCCGATGAATTAGAATCGGTGTTGAACGAATTTGCCGCGCAAAATTGGCAATCCG
ATGAACGCTATGTAGAAGCATTTATCAACAGCAAAAGTCGCAAACATGGCGCGATGCGTTTGAGACAAGAACTTGCCAGT
AAAGGCGTGGACGAAGATTTGGTGCGCGAATATCTGCCCGATGAGGAAACCGAACGCAAAAATGCAGCTCAAGTGTTACG
CAAAAAATTCAAGCAGCCTGCGGCAGATTATGCGGAAAAACAAAAGCAAATCCGTTTTTTGCTGTATCGCGGATTTGATA
TGGATACGATTCATGCGGTGATGAAAACCGCGTGGGATGAAGAAGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

66.667

98.658

0.658