Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HP1CL_RS01710 | Genome accession | NZ_AP013356 |
| Coordinates | 348361..348765 (+) | Length | 134 a.a. |
| NCBI ID | WP_000599146.1 | Uniprot ID | - |
| Organism | Helicobacter pylori 26695-1CL | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 343361..353765
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP1CL_RS01675 | - | 343533..344471 (-) | 939 | WP_000833936.1 | tetraacyldisaccharide 4'-kinase | - |
| HP1CL_RS01680 | - | 344468..345250 (-) | 783 | WP_001168317.1 | NAD+ synthase | - |
| HP1CL_RS01690 | ilvC | 345499..346491 (+) | 993 | WP_001207734.1 | ketol-acid reductoisomerase | - |
| HP1CL_RS01695 | minD | 346516..347322 (+) | 807 | WP_001019069.1 | septum site-determining protein MinD | - |
| HP1CL_RS01700 | minE | 347319..347552 (+) | 234 | WP_000051415.1 | cell division topological specificity factor MinE | - |
| HP1CL_RS01705 | dprA | 347564..348364 (+) | 801 | WP_001862983.1 | DNA-processing protein DprA | Machinery gene |
| HP1CL_RS01710 | dprB | 348361..348765 (+) | 405 | WP_000599146.1 | Holliday junction resolvase RuvX | Machinery gene |
| HP1CL_RS08850 | - | 349051..349239 (+) | 189 | WP_010875464.1 | hypothetical protein | - |
| HP1CL_RS01720 | - | 349181..349597 (+) | 417 | WP_001862988.1 | tetratricopeptide repeat protein | - |
| HP1CL_RS01725 | - | 349724..350029 (+) | 306 | WP_000699933.1 | hypothetical protein | - |
| HP1CL_RS01730 | - | 350013..350579 (+) | 567 | WP_000032376.1 | hypothetical protein | - |
| HP1CL_RS01735 | - | 350631..350987 (+) | 357 | WP_015056036.1 | glycoside hydrolase family protein | - |
| HP1CL_RS01740 | - | 350975..351241 (+) | 267 | WP_001862993.1 | hypothetical protein | - |
| HP1CL_RS01750 | - | 351547..351933 (+) | 387 | WP_000393582.1 | DUF1294 domain-containing protein | - |
| HP1CL_RS08215 | - | 351933..352719 (+) | 787 | Protein_331 | hypothetical protein | - |
| HP1CL_RS01765 | - | 352709..353044 (+) | 336 | WP_001862999.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15255.75 Da Isoelectric Point: 9.1646
>NTDB_id=65665 HP1CL_RS01710 WP_000599146.1 348361..348765(+) (dprB) [Helicobacter pylori 26695-1CL]
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPHESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQKVLKNH
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPHESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQKVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=65665 HP1CL_RS01710 WP_000599146.1 348361..348765(+) (dprB) [Helicobacter pylori 26695-1CL]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCGCTTTTAAATGGCGTTATCTTGCCCTTAGAAGC
GATCTTACGCCACAACAGAAACCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCCATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGTCGGTTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAAAAGGTTTTGAAAAATC
ATTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCGCTTTTAAATGGCGTTATCTTGCCCTTAGAAGC
GATCTTACGCCACAACAGAAACCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCCATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGTCGGTTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAAAAGGTTTTGAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
100 |
100 |
1 |