Detailed information
Bioinformatically predicted
Overview
| Name | comH | Type | Machinery gene |
| Locus tag | HP1WT_RS07865 | Genome accession | NZ_AP013354 |
| Coordinates | 1605727..1607166 (-) | Length | 479 a.a. |
| NCBI ID | WP_000749005.1 | Uniprot ID | A0AAC8N2R8 |
| Organism | Helicobacter pylori 26695-1 | ||
| Function | import of DNA into the periplasm (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1600727..1612166
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP1WT_RS07840 | recG | 1601859..1603730 (-) | 1872 | WP_001158370.1 | ATP-dependent DNA helicase RecG | - |
| HP1WT_RS07845 | - | 1603812..1604159 (+) | 348 | WP_000837022.1 | lipoprotein | - |
| HP1WT_RS07850 | - | 1604163..1604798 (+) | 636 | WP_000765634.1 | outer membrane protein | - |
| HP1WT_RS07855 | - | 1604795..1605547 (-) | 753 | WP_000767556.1 | exodeoxyribonuclease III | - |
| HP1WT_RS07865 | comH | 1605727..1607166 (-) | 1440 | WP_000749005.1 | hypothetical protein | Machinery gene |
| HP1WT_RS07875 | dnaA | 1607395..1608768 (-) | 1374 | WP_000380647.1 | chromosomal replication initiator protein DnaA | - |
| HP1WT_RS07880 | - | 1608921..1609463 (+) | 543 | WP_000923009.1 | hypothetical protein | - |
| HP1WT_RS07885 | - | 1609506..1609745 (+) | 240 | WP_000461837.1 | DUF2443 domain-containing protein | - |
| HP1WT_RS07890 | glmS | 1609746..1611539 (+) | 1794 | WP_000334435.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
Sequence
Protein
Download Length: 479 a.a. Molecular weight: 54783.74 Da Isoelectric Point: 7.0430
>NTDB_id=65632 HP1WT_RS07865 WP_000749005.1 1605727..1607166(-) (comH) [Helicobacter pylori 26695-1]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV
Nucleotide
Download Length: 1440 bp
>NTDB_id=65632 HP1WT_RS07865 WP_000749005.1 1605727..1607166(-) (comH) [Helicobacter pylori 26695-1]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAAAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACAACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAGCAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
GTGAAAACAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
AACTGCAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATTAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAGCCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTATGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAAAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACAACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAGCAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
GTGAAAACAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
AACTGCAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATTAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAGCCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTATGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comH | Helicobacter pylori 26695 |
100 |
100 |
1 |