Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MF598_RS12695 Genome accession   NZ_CP092185
Coordinates   2625249..2625713 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain K203     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2620249..2630713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MF598_RS12670 (MF598_12670) - 2620756..2621304 (-) 549 WP_007409614.1 hypothetical protein -
  MF598_RS12675 (MF598_12675) fadH 2621418..2622182 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  MF598_RS12680 (MF598_12680) - 2622326..2623189 (+) 864 WP_045207275.1 metallophosphoesterase -
  MF598_RS12685 (MF598_12685) - 2623264..2623758 (+) 495 WP_095284082.1 L,D-transpeptidase family protein -
  MF598_RS12690 (MF598_12690) - 2623834..2625126 (+) 1293 WP_015239757.1 MFS transporter -
  MF598_RS12695 (MF598_12695) kre 2625249..2625713 (+) 465 WP_003154622.1 YkyB family protein Regulator
  MF598_RS12700 (MF598_12700) cheV 2625756..2626667 (-) 912 WP_007409609.1 chemotaxis protein CheV -
  MF598_RS12705 (MF598_12705) - 2626856..2627017 (+) 162 WP_007409608.1 hypothetical protein -
  MF598_RS12710 (MF598_12710) - 2627218..2628387 (+) 1170 WP_224224222.1 aminotransferase A -
  MF598_RS12715 (MF598_12715) - 2628412..2630232 (-) 1821 WP_023356869.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=656263 MF598_RS12695 WP_003154622.1 2625249..2625713(+) (kre) [Bacillus velezensis strain K203]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=656263 MF598_RS12695 WP_003154622.1 2625249..2625713(+) (kre) [Bacillus velezensis strain K203]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929