Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HP1WT_RS01720 | Genome accession | NZ_AP013354 |
| Coordinates | 348367..348771 (+) | Length | 134 a.a. |
| NCBI ID | WP_000599146.1 | Uniprot ID | - |
| Organism | Helicobacter pylori 26695-1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 343367..353771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP1WT_RS01685 | - | 343539..344477 (-) | 939 | WP_000833936.1 | tetraacyldisaccharide 4'-kinase | - |
| HP1WT_RS01690 | - | 344474..345256 (-) | 783 | WP_001168317.1 | NAD+ synthase | - |
| HP1WT_RS01700 | ilvC | 345505..346497 (+) | 993 | WP_001207734.1 | ketol-acid reductoisomerase | - |
| HP1WT_RS01705 | minD | 346522..347328 (+) | 807 | WP_001019069.1 | septum site-determining protein MinD | - |
| HP1WT_RS01710 | minE | 347325..347558 (+) | 234 | WP_000051415.1 | cell division topological specificity factor MinE | - |
| HP1WT_RS01715 | dprA | 347570..348370 (+) | 801 | WP_001862983.1 | DNA-processing protein DprA | Machinery gene |
| HP1WT_RS01720 | dprB | 348367..348771 (+) | 405 | WP_000599146.1 | Holliday junction resolvase RuvX | Machinery gene |
| HP1WT_RS08870 | - | 349057..349245 (+) | 189 | WP_010875464.1 | hypothetical protein | - |
| HP1WT_RS01730 | - | 349187..349603 (+) | 417 | WP_001862988.1 | tetratricopeptide repeat protein | - |
| HP1WT_RS01735 | - | 349730..350035 (+) | 306 | WP_000699933.1 | hypothetical protein | - |
| HP1WT_RS01740 | - | 350019..350585 (+) | 567 | WP_000032376.1 | hypothetical protein | - |
| HP1WT_RS01745 | - | 350637..350993 (+) | 357 | WP_015056036.1 | glycoside hydrolase family protein | - |
| HP1WT_RS01750 | - | 350981..351247 (+) | 267 | WP_001862993.1 | hypothetical protein | - |
| HP1WT_RS01760 | - | 351553..351939 (+) | 387 | WP_000393582.1 | DUF1294 domain-containing protein | - |
| HP1WT_RS08230 | - | 351939..352725 (+) | 787 | Protein_332 | hypothetical protein | - |
| HP1WT_RS01775 | - | 352715..353050 (+) | 336 | WP_001862999.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15255.75 Da Isoelectric Point: 9.1646
>NTDB_id=65621 HP1WT_RS01720 WP_000599146.1 348367..348771(+) (dprB) [Helicobacter pylori 26695-1]
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPHESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQKVLKNH
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPHESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQKVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=65621 HP1WT_RS01720 WP_000599146.1 348367..348771(+) (dprB) [Helicobacter pylori 26695-1]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCGCTTTTAAATGGCGTTATCTTGCCCTTAGAAGC
GATCTTACGCCACAACAGAAACCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCCATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGTCGGTTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAAAAGGTTTTGAAAAATC
ATTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCGCTTTTAAATGGCGTTATCTTGCCCTTAGAAGC
GATCTTACGCCACAACAGAAACCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCCATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGTCGGTTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAAAAGGTTTTGAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
100 |
100 |
1 |