Detailed information NTG0656187

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: MF263_RS15505
• Genome accession: NZ_CP092182
• Coordinates: 3313981..3315006 (-)
• Length: 341 a.a.
• NCBI ID: WP_306459881.1
• Uniprot ID: -
• Organism: Alcaligenes faecalis strain T17
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3308981..3320006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MF263_RS15480 (MF263_15480)	nusB	3309079..3309564 (-)	486	WP_009454782.1	transcription antitermination factor NusB	-
MF263_RS15485 (MF263_15485)	ribH	3309548..3310066 (-)	519	WP_009454781.1	6,7-dimethyl-8-ribityllumazine synthase	-
MF263_RS15490 (MF263_15490)	ribBA	3310081..3311247 (-)	1167	WP_239054601.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-
MF263_RS15495 (MF263_15495)	-	3311363..3312190 (+)	828	WP_022983222.1	IclR family transcriptional regulator	-
MF263_RS15500 (MF263_15500)	-	3312310..3313839 (+)	1530	WP_022983223.1	CYTH and CHAD domain-containing protein	-
MF263_RS15505 (MF263_15505)	pilA	3313981..3315006 (-)	1026	WP_306459881.1	signal recognition particle-docking protein FtsY	Machinery gene
MF263_RS15510 (MF263_15510)	rsmD	3315527..3316156 (+)	630	WP_226349433.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
MF263_RS15515 (MF263_15515)	coaD	3316177..3316683 (+)	507	WP_009454773.1	pantetheine-phosphate adenylyltransferase	-
MF263_RS15520 (MF263_15520)	-	3316769..3317026 (+)	258	WP_009454772.1	YfhL family 4Fe-4S dicluster ferredoxin	-
MF263_RS15525 (MF263_15525)	-	3317090..3317482 (-)	393	WP_115634358.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 35836.29 Da
• Isoelectric Point: 5.4568

>NTDB_id=656187 MF263_RS15505 WP_306459881.1 3313981..3315006(-) (pilA) [Alcaligenes faecalis strain T17]
MQPTPEPEPEIVPVPAPQPDPAPAPTPEPEAAAPVVKTSWMARLKQGLSRTGQSLSSLFVGAKVDETLFEELEDALLMAD
AGVEATEKLITALRARVRKEKISDAAQVKQALCDILTDHLKPLEKSFPLESSKPLVVMIAGVNGAGKTTSIGKLAHTFQE
QGAKVLLAAGDTFRAAAREQLIEWGTRNNVSVIAQDGGDPAAVAFDAVHAGRARDMGVVMVDTAGRLPTQLHLMEELKKI
KRVIGKADGQAPHEILLVVDGNTGQNAISQIRAFDAALGLTGLVVTKLDGTAKGGTLAAVAACAQGVRPIPVYWIGVGEG
MQDLQAFVAREFASALLGMNA

Nucleotide

• Length: 1026 bp

>NTDB_id=656187 MF263_RS15505 WP_306459881.1 3313981..3315006(-) (pilA) [Alcaligenes faecalis strain T17]
ATACAGCCGACTCCTGAACCGGAGCCAGAGATTGTTCCAGTTCCTGCGCCACAGCCTGACCCAGCACCTGCCCCGACGCC
AGAGCCAGAAGCCGCCGCACCTGTGGTGAAAACTTCCTGGATGGCACGCTTGAAACAGGGCTTGTCGCGTACCGGTCAGA
GCTTGAGCAGCCTGTTCGTCGGTGCCAAGGTTGATGAAACGCTGTTCGAGGAACTGGAAGACGCCTTGCTGATGGCAGAC
GCGGGTGTTGAGGCTACCGAGAAACTGATTACCGCCTTGCGTGCTCGTGTTCGCAAGGAAAAAATCAGCGATGCAGCCCA
AGTCAAACAAGCCCTGTGCGACATCCTGACCGATCATTTGAAGCCCCTGGAGAAATCCTTTCCTCTGGAATCGAGCAAAC
CACTGGTAGTCATGATTGCCGGGGTGAATGGTGCAGGTAAAACCACGTCTATCGGTAAGTTGGCCCACACCTTCCAGGAG
CAGGGCGCAAAAGTCTTGTTGGCCGCCGGTGATACCTTCCGTGCCGCCGCTCGTGAACAACTGATTGAGTGGGGCACCCG
CAATAACGTCAGTGTTATTGCTCAAGACGGTGGTGACCCCGCTGCGGTGGCGTTTGATGCCGTGCATGCAGGGCGTGCCC
GCGATATGGGCGTGGTCATGGTGGATACCGCCGGCCGCTTGCCAACCCAGCTTCACCTGATGGAAGAGCTCAAGAAGATC
AAGCGCGTCATCGGCAAGGCCGATGGTCAGGCTCCTCATGAAATTCTCTTGGTTGTGGACGGCAATACCGGCCAGAACGC
CATTTCGCAGATCCGTGCCTTTGATGCAGCCTTGGGTCTGACTGGCCTGGTGGTTACCAAGCTGGACGGTACGGCCAAAG
GCGGTACGCTGGCTGCCGTTGCTGCCTGTGCGCAAGGCGTACGTCCTATTCCGGTTTACTGGATTGGCGTGGGCGAGGGC
ATGCAGGATCTGCAGGCCTTTGTGGCCCGTGAGTTTGCGTCGGCCTTGTTGGGCATGAACGCTTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (135-338)

• SRP54-type protein, helical bundle domain (SRP54_N) (52-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	59.477	89.736	0.534