Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA48_RS24765 Genome accession   NZ_CP108201
Coordinates   5316879..5318003 (-) Length   374 a.a.
NCBI ID   WP_266519052.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00114     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5311879..5323003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA48_RS24740 (OHA48_24790) cseB 5312494..5313198 (-) 705 WP_266519037.1 two-component system response regulator CseB -
  OHA48_RS24745 (OHA48_24795) - 5313247..5313909 (-) 663 WP_266798520.1 hypothetical protein -
  OHA48_RS24750 (OHA48_24800) - 5313897..5314436 (-) 540 WP_266519041.1 SigE family RNA polymerase sigma factor -
  OHA48_RS24755 (OHA48_24805) - 5314699..5315646 (-) 948 WP_266682913.1 A/G-specific adenine glycosylase -
  OHA48_RS24760 (OHA48_24810) - 5315813..5316634 (+) 822 WP_266682914.1 hypothetical protein -
  OHA48_RS24765 (OHA48_24815) disA 5316879..5318003 (-) 1125 WP_266519052.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA48_RS24770 (OHA48_24820) radA 5318085..5319494 (-) 1410 WP_266682915.1 DNA repair protein RadA Machinery gene
  OHA48_RS24775 (OHA48_24825) - 5319815..5321041 (+) 1227 WP_266801861.1 IS110 family transposase -
  OHA48_RS24780 (OHA48_24830) - 5321204..5322898 (+) 1695 WP_266798523.1 BACON domain-containing protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40123.90 Da        Isoelectric Point: 4.9989

>NTDB_id=656146 OHA48_RS24765 WP_266519052.1 5316879..5318003(-) (disA) [Streptomyces sp. NBC_00114]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTGLRDGLERVLRGNTGGLIVLGFDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQFLPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELNALAHAELLELPTVARALGYTGAPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=656146 OHA48_RS24765 WP_266519052.1 5316879..5318003(-) (disA) [Streptomyces sp. NBC_00114]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGTTCCGGTGCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCTCCCGGTACCGGCCTGCGCGACGGCCTTGAGCGCGTACTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGTTTCGACAAGACCGTCGAGACGATGTGCACGGGCGGTTTCGTGCTCGACGTCGAGTTCACGGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCCTCGGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGTTCCTGCC
CGACGCGACGATCCCGACCGAGGAGACCGGCACCCGGCACCGTACGGCGGACCGCGTCTCGAAGCAGGTGGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGATGTGTCGGCGGTGGCCCAGCGTCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACCGACGGGCGTCTGCTGGCCCTGCAGCTCGACGAGCTGATCGCG
GGCGTGGAGCCCGAGCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCCACGGCCAAGCGCTCGCGCACGGTCGACGA
AGCGCTCTACGAACTCAACGCCCTCGCCCACGCCGAGCTTCTCGAACTGCCCACGGTGGCACGGGCGTTGGGATACACCG
GAGCCCCGGAAACCCTGGACTCGGCGGTCTCGCCGCGCGGCTTCCGCCTGCTGGCCAAGGTGCCACGCCTGCCGGGCGCC
ATCATCGACCGTCTCGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTGCAGACCGTCGA
CGGCGTCGGCGAGGCACGGGCCCGGAGCGTGCGCGAGGGACTGTCCAGACTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441