Detailed information NTG0065600

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H7R28_RS00945
• Genome accession: NZ_AP022069
• Coordinates: 217065..218048 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain WP4-W18-ESBL-09
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 212065..223048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R28_RS00930 (WP4W18E09_01830)	dppA	213365..214972 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
H7R28_RS00935 (WP4W18E09_01840)	dppB	215123..216142 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H7R28_RS00940 (WP4W18E09_01850)	dppC	216152..217054 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H7R28_RS00945 (WP4W18E09_01860)	amiE	217065..218048 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
H7R28_RS00950 (WP4W18E09_01870)	dppF	218045..219049 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H7R28_RS00955 (WP4W18E09_01880)	yhjV	219079..220350 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
H7R28_RS00960 (WP4W18E09_01890)	-	220826..220933 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H7R28_RS00965 (WP4W18E09_01900)	-	221310..221417 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
H7R28_RS00970 (WP4W18E09_01910)	-	221793..221900 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=65600 H7R28_RS00945 WP_001196487.1 217065..218048(+) (amiE) [Escherichia coli strain WP4-W18-ESBL-09]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=65600 H7R28_RS00945 WP_001196487.1 217065..218048(+) (amiE) [Escherichia coli strain WP4-W18-ESBL-09]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407