Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LGL65_RS04755 Genome accession   NZ_CP092110
Coordinates   934247..934438 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain LOH112     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 929247..939438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LGL65_RS04730 - 929604..930590 (-) 987 WP_017417448.1 ABC transporter ATP-binding protein -
  LGL65_RS04735 - 930764..931549 (-) 786 WP_017417447.1 DUF2268 domain-containing protein -
  LGL65_RS04740 fabF 931633..932871 (-) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  LGL65_RS04745 - 932894..933832 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  LGL65_RS04750 - 934000..934218 (+) 219 WP_007409123.1 hypothetical protein -
  LGL65_RS04755 comZ 934247..934438 (-) 192 WP_003155061.1 ComZ family protein Regulator
  LGL65_RS04760 med 934451..935404 (-) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  LGL65_RS04765 - 935495..936061 (-) 567 WP_032863798.1 hypothetical protein -
  LGL65_RS04770 - 936144..936878 (-) 735 WP_014417405.1 hypothetical protein -
  LGL65_RS04775 - 937139..937324 (+) 186 WP_007409129.1 YjzD family protein -
  LGL65_RS04780 - 937361..937540 (-) 180 WP_003155070.1 YjzC family protein -
  LGL65_RS04785 argF 937615..938586 (-) 972 WP_110085548.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=655939 LGL65_RS04755 WP_003155061.1 934247..934438(-) (comZ) [Bacillus velezensis strain LOH112]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=655939 LGL65_RS04755 WP_003155061.1 934247..934438(-) (comZ) [Bacillus velezensis strain LOH112]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794