Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LGL65_RS02720 Genome accession   NZ_CP092110
Coordinates   571935..572399 (+) Length   154 a.a.
NCBI ID   WP_014417605.1    Uniprot ID   I2C4C5
Organism   Bacillus velezensis strain LOH112     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 566935..577399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LGL65_RS02695 - 567442..567990 (-) 549 WP_017417677.1 hypothetical protein -
  LGL65_RS02700 fadH 568104..568868 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  LGL65_RS02705 - 569012..569875 (+) 864 WP_071181738.1 metallophosphoesterase -
  LGL65_RS02710 - 569950..570444 (+) 495 WP_094296114.1 L,D-transpeptidase family protein -
  LGL65_RS02715 - 570520..571812 (+) 1293 WP_014417606.1 MFS transporter -
  LGL65_RS02720 kre 571935..572399 (+) 465 WP_014417605.1 YkyB family protein Regulator
  LGL65_RS02725 cheV 572442..573353 (-) 912 WP_017417674.1 chemotaxis protein CheV -
  LGL65_RS02730 - 573542..573703 (+) 162 WP_007409608.1 hypothetical protein -
  LGL65_RS02735 - 573904..575073 (+) 1170 WP_007611083.1 aminotransferase A -
  LGL65_RS02740 - 575099..576919 (-) 1821 WP_238810298.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.60 Da        Isoelectric Point: 10.5497

>NTDB_id=655932 LGL65_RS02720 WP_014417605.1 571935..572399(+) (kre) [Bacillus velezensis strain LOH112]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=655932 LGL65_RS02720 WP_014417605.1 571935..572399(+) (kre) [Bacillus velezensis strain LOH112]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C4C5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929