Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   LGL65_RS02620 Genome accession   NZ_CP092110
Coordinates   555938..556534 (-) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain LOH112     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 550938..561534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LGL65_RS02595 mobB 551314..551835 (-) 522 WP_017417687.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  LGL65_RS02600 glp 551796..553088 (-) 1293 WP_017417686.1 gephyrin-like molybdotransferase Glp -
  LGL65_RS02605 - 553106..554125 (-) 1020 WP_017417685.1 molybdopterin-synthase adenylyltransferase MoeB -
  LGL65_RS02610 - 554177..554779 (-) 603 WP_025649507.1 molybdenum cofactor guanylyltransferase -
  LGL65_RS02615 - 554925..555917 (+) 993 WP_014417619.1 hypothetical protein -
  LGL65_RS02620 rok 555938..556534 (-) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  LGL65_RS02625 - 556986..557444 (-) 459 WP_025649508.1 TlpA disulfide reductase family protein -
  LGL65_RS02630 - 557732..558538 (+) 807 WP_025649509.1 mechanosensitive ion channel family protein -
  LGL65_RS02635 - 558572..558817 (-) 246 WP_003154596.1 YkuS family protein -
  LGL65_RS02640 - 558878..560002 (-) 1125 WP_017417680.1 N-acetyldiaminopimelate deacetylase -
  LGL65_RS02645 dapD 560073..560783 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  LGL65_RS02650 - 560865..561320 (-) 456 WP_014417614.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=655931 LGL65_RS02620 WP_003154591.1 555938..556534(-) (rok) [Bacillus velezensis strain LOH112]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=655931 LGL65_RS02620 WP_003154591.1 555938..556534(-) (rok) [Bacillus velezensis strain LOH112]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCGGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843