Detailed information NTG0655897

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: L3Q72_RS02375
• Genome accession: NZ_CP092106
• Coordinates: 486234..489578 (-)
• Length: 1114 a.a.
• NCBI ID: WP_275131084.1
• Uniprot ID: -
• Organism: Vibrio sp. JC009
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 481234..494578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3Q72_RS02355 (L3Q72_02350)	-	481746..482771 (-)	1026	WP_275131080.1	ABC transporter permease	-
L3Q72_RS02360 (L3Q72_02355)	-	482774..483760 (-)	987	WP_275131081.1	ABC transporter permease	-
L3Q72_RS02365 (L3Q72_02360)	-	483909..485576 (-)	1668	WP_275131082.1	ABC transporter substrate-binding protein	-
L3Q72_RS02370 (L3Q72_02365)	-	486075..486209 (+)	135	WP_275131083.1	entericidin EcnAB	-
L3Q72_RS02375 (L3Q72_02370)	chiS	486234..489578 (-)	3345	WP_275131084.1	ATP-binding protein	Regulator
L3Q72_RS02380 (L3Q72_02375)	rsmC	489712..490734 (-)	1023	WP_275131085.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
L3Q72_RS02385 (L3Q72_02380)	-	490934..492019 (-)	1086	WP_275131086.1	AI-2E family transporter	-
L3Q72_RS02390 (L3Q72_02385)	hemL	492457..493749 (-)	1293	WP_275131087.1	glutamate-1-semialdehyde 2,1-aminomutase	-
L3Q72_RS02395 (L3Q72_02390)	erpA	494022..494363 (+)	342	WP_275131088.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1114 a.a.
• Molecular weight: 125634.02 Da
• Isoelectric Point: 6.4582

>NTDB_id=655897 L3Q72_RS02375 WP_275131084.1 486234..489578(-) (chiS) [Vibrio sp. JC009]
MIKKRKKNLFKKLRNTLMTAFLTLSLIPLTLIALFFLHSHSKDLQEQSHSYLVSVRDTKQQQILDYFEAKRTEVSGFVRS
ELAYASGGRFYGLVKAFRLLGSDIEEARTNLKQRYITGSGDKIKTSVNKKSKDYTSTERYRLLHKRYHRGYVEHLKRSDF
DDILLVDFEGNVAYSTLKSDNIGANLLSDNYKSTNLGITFLRIRKEMNSYQSRPDETLPVVISDFSAEHENSYAWFAAPI
VQQGYLHSYALFRLPLEGIDVLVDDNSDALQLLLTGSDLTSRSSSLAQEDINNNQYAVNRALKGITEVNTYTNSKGERII
AASAPVSFMGLNWALSVQLSEDVAYARVHHLKKVFIAAMLLAFALVVIASHFLSRFITDPLLKLTWAAEKVSAGELEHNM
LSTDRTDEIGRLAVSFERMRASIREKILTIGKQNDELEKNLRLIRQQNLELQQADKLKDEFLASTSYELRTPLHGIIGIA
EALASGSIGSVPAHQKYQLEIIINSGKRLSNLVDDLLDYHKMRYGHMEINKQATDLFSATSLVLQLSGHLLKGKRIRILN
QIPDELPKISADPERLEQVLYNLIGNAVRYTHEGKIVISATALNHHVRVQIVDTGQGIPPQYLEHADKFRQGTGIGLSIS
YQLIELMGGNLYISSQPYVGTTFSFSLPLASEDNSELAKETHPVHFQLPEIPKQPEPDSSAFPENSDGPLILVADANPVT
LQVVESFLRYEGYRVITSSEGCEVLKQIQEEQPEILLLDIMLPGISSYEICESIRNEFSQAELPVIMLTSQNQTEERTKG
FGSGANDYLIKPFSKQELTARVSTNLAAGKTQTSLLENHQLQQEVESQKITETELLMAQKTLLERLDSTQEAILCVNLED
KVIFANQAASMLFKKTAGQLTRSHLNELIARKYCYMLTDQYSGDIEIFTGDRQRKIPGDIITLPESSGIRLLFIFDSGKS
ASSERIHSLETAVEVLSSYACEGDKDKLEQLQNLGDEFKEVVQKVSGNAQDKQQQLRELLVAAMTTAIGYWETSTGKSKF
DFAEASGLWRVYLDRSTLQTRTLDKYLRLETLPKTPRWRTVLSSLDYILDKCADQDTDQRKELEQLRSQLAKLI

Nucleotide

• Length: 3345 bp

>NTDB_id=655897 L3Q72_RS02375 WP_275131084.1 486234..489578(-) (chiS) [Vibrio sp. JC009]
ATGATTAAAAAGAGAAAAAAGAACCTATTTAAGAAGCTTCGCAACACACTGATGACAGCTTTTCTGACTCTGAGCCTGAT
TCCCCTCACCTTAATTGCCCTCTTTTTTCTCCACTCCCACAGCAAAGATCTGCAGGAGCAGAGCCACTCGTATCTGGTGT
CGGTGCGGGACACCAAACAGCAACAGATACTGGACTATTTTGAAGCCAAAAGAACCGAGGTTTCCGGTTTCGTCCGCTCA
GAGCTTGCCTATGCCAGTGGCGGACGCTTCTATGGTCTGGTCAAGGCCTTCCGGCTGCTTGGCTCTGATATTGAAGAGGC
GCGGACAAATCTTAAGCAGCGCTATATCACTGGCTCCGGAGATAAAATAAAGACCTCGGTAAATAAAAAGTCTAAGGACT
ACACCAGCACAGAAAGATACCGTCTGCTGCACAAGAGATACCACAGAGGTTATGTGGAACATCTCAAACGCTCTGATTTT
GACGATATTCTCCTGGTCGACTTTGAAGGGAACGTCGCCTATTCAACACTAAAAAGTGACAATATTGGAGCGAACCTGCT
AAGCGATAACTACAAGAGCACCAATCTGGGAATCACTTTTCTGAGAATCCGGAAGGAAATGAATTCATATCAGAGCAGGC
CGGATGAAACACTTCCTGTGGTTATCTCTGATTTTTCAGCAGAGCACGAAAATAGTTATGCATGGTTTGCCGCTCCGATT
GTTCAGCAAGGCTATCTGCACAGCTATGCCCTGTTCCGCCTCCCGCTTGAGGGAATCGATGTGCTGGTTGATGACAACAG
CGATGCGCTTCAGCTCCTGCTTACCGGCTCTGACCTGACTTCAAGATCCTCTTCACTCGCTCAGGAAGACATTAACAACA
ACCAGTACGCAGTAAACCGCGCTCTGAAGGGTATTACAGAAGTAAATACTTACACCAACTCCAAAGGCGAAAGAATAATA
GCAGCATCCGCTCCGGTTTCCTTTATGGGACTAAACTGGGCGCTCTCGGTTCAGCTTTCAGAAGATGTCGCCTATGCCAG
AGTTCATCATCTGAAAAAAGTCTTTATTGCCGCTATGCTTCTGGCATTTGCACTTGTGGTTATCGCTTCGCATTTTTTGT
CCCGCTTTATAACCGACCCGCTGCTTAAACTAACCTGGGCAGCAGAAAAAGTCTCAGCAGGCGAACTGGAACACAATATG
CTCAGCACCGACAGAACCGATGAAATAGGCCGTCTGGCTGTCAGCTTTGAAAGGATGCGCGCGTCTATCCGGGAAAAAAT
ACTCACCATAGGTAAACAAAATGATGAGCTGGAAAAAAATCTCAGACTTATCCGCCAGCAAAACCTGGAGCTTCAGCAGG
CAGATAAACTCAAGGACGAATTCCTGGCCTCCACTTCCTATGAGTTGCGAACGCCGCTTCACGGAATTATAGGAATCGCA
GAAGCACTGGCCTCAGGTTCCATCGGCTCTGTTCCGGCCCATCAGAAATACCAGTTAGAGATCATCATAAATAGCGGCAA
GCGCCTGTCTAATCTGGTTGATGACCTGCTGGATTATCATAAGATGCGTTATGGTCATATGGAGATAAATAAACAGGCAA
CGGATCTGTTTTCTGCCACCAGCCTGGTTTTGCAGTTATCCGGCCATCTTCTGAAGGGAAAACGAATCCGTATTCTGAAC
CAGATCCCGGACGAACTGCCCAAAATCTCCGCCGATCCGGAAAGGCTCGAGCAGGTTCTCTACAACCTTATCGGCAACGC
TGTCAGATACACTCATGAGGGTAAGATCGTCATTTCAGCCACGGCTTTAAATCACCATGTCAGAGTACAGATCGTGGATA
CCGGCCAGGGGATCCCGCCGCAATACCTGGAACATGCTGACAAATTCAGGCAGGGAACCGGGATCGGCCTTTCCATCAGC
TATCAGCTAATTGAGTTAATGGGCGGTAATCTTTATATCAGCAGTCAGCCATATGTTGGAACAACCTTCAGCTTCAGCCT
GCCTCTGGCTTCTGAAGATAACTCGGAACTGGCAAAGGAAACTCACCCGGTTCACTTTCAGCTGCCTGAAATACCAAAGC
AGCCAGAGCCTGATAGCTCCGCTTTTCCTGAAAACAGTGACGGACCGCTTATCCTGGTGGCCGACGCAAACCCTGTGACT
CTCCAGGTGGTTGAAAGCTTTTTACGCTATGAAGGCTACCGCGTAATCACCTCCTCTGAAGGATGTGAAGTGCTAAAACA
GATACAGGAAGAGCAGCCGGAAATCTTATTGCTGGACATTATGCTTCCGGGGATCAGCAGCTATGAGATTTGTGAATCAA
TTCGCAACGAATTCAGCCAGGCAGAGCTGCCTGTCATTATGCTCACTTCTCAAAATCAAACGGAAGAAAGAACAAAAGGG
TTCGGGTCCGGAGCCAATGATTATCTGATAAAACCCTTTAGCAAGCAGGAGCTGACCGCAAGAGTTTCCACCAATCTGGC
AGCCGGTAAAACGCAAACCAGCCTTTTAGAAAACCACCAGCTGCAACAGGAGGTTGAAAGCCAGAAAATCACAGAAACAG
AGCTGCTCATGGCCCAGAAAACCCTGCTTGAGAGGCTGGACTCCACACAGGAAGCTATCCTCTGCGTTAACCTGGAAGAT
AAGGTTATCTTTGCTAATCAGGCTGCATCTATGCTTTTCAAAAAGACCGCCGGCCAGCTTACACGCTCCCACCTGAACGA
GCTTATCGCCAGAAAGTACTGCTACATGCTGACGGATCAATACAGCGGCGATATAGAAATCTTCACCGGTGACCGGCAAC
GAAAAATACCGGGCGATATTATTACGCTTCCAGAAAGCTCAGGTATCCGTTTGCTGTTTATCTTTGATAGCGGAAAGTCT
GCCAGCAGCGAAAGGATACACAGCCTGGAAACCGCGGTTGAAGTACTCTCTTCCTACGCCTGCGAGGGAGATAAGGACAA
ACTGGAACAGCTTCAGAATCTGGGCGATGAGTTTAAGGAAGTGGTGCAGAAGGTCAGCGGAAACGCTCAGGATAAACAGC
AACAACTCCGAGAGCTGCTGGTTGCTGCAATGACAACAGCCATCGGCTACTGGGAAACCTCCACAGGCAAAAGCAAGTTC
GACTTTGCTGAAGCCAGCGGTCTGTGGCGGGTTTATCTGGACAGAAGCACTCTGCAGACCCGTACGCTGGACAAATACCT
CAGACTGGAAACCCTGCCAAAAACCCCAAGGTGGCGCACCGTCCTCAGCTCTCTGGACTATATTCTGGATAAATGCGCAG
ACCAGGATACAGACCAGCGCAAAGAGCTTGAGCAGCTAAGAAGCCAGTTAGCCAAACTTATCTGA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (372-425)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (572-670)

• His Kinase A (phospho-acceptor) domain (HisKA) (458-523)

• Response regulator receiver domain (Response_reg) (711-822)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	58.74	100	0.594