Detailed information NTG0655855

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: MBM09_RS02785
• Genome accession: NZ_CP092099
• Coordinates: 630671..632029 (+)
• Length: 452 a.a.
• NCBI ID: WP_238675330.1
• Uniprot ID: -
• Organism: Flaviramulus sp. BrNp1-15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 625671..637029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MBM09_RS02760 (MBM09_02760)	-	626234..627043 (-)	810	WP_238675325.1	glycogen/starch synthase	-
MBM09_RS02765 (MBM09_02765)	panC	627244..628095 (+)	852	WP_238675326.1	pantoate--beta-alanine ligase	-
MBM09_RS02770 (MBM09_02770)	panD	628109..628459 (+)	351	WP_238675327.1	aspartate 1-decarboxylase	-
MBM09_RS02775 (MBM09_02775)	-	628526..629419 (+)	894	WP_370569717.1	lysylphosphatidylglycerol synthase transmembrane domain-containing protein	-
MBM09_RS02780 (MBM09_02780)	-	629523..630671 (+)	1149	WP_238675329.1	alpha/beta hydrolase	-
MBM09_RS02785 (MBM09_02785)	radA	630671..632029 (+)	1359	WP_238675330.1	DNA repair protein RadA	Machinery gene

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 49817.32 Da
• Isoelectric Point: 6.3731

>NTDB_id=655855 MBM09_RS02785 WP_238675330.1 630671..632029(+) (radA) [Flaviramulus sp. BrNp1-15]
MAKVKTTFFCQNCGTQYAKWQGQCNACKEWNTIVEEVIQKPEKSDWKTSNSTIKRVSVPLRINEIDASKEARLDTFDAEF
NRVLGGGIVPGSLTLLGGEPGIGKSTLLLQVSLKLPYKTLYVSGEESQKQIKMRAERINPENNNCYILTETKTQNIFKQI
EALEPDIVIIDSIQTLHSDYIESSSGSISQIKECTTELIKFAKETATPVVLIGHITKDGNIAGPKILEHMVDTVLQFEGD
RNHVFRILRAHKNRFGSTNELGIYEMQGSGLREVSNPSEILISKKDEELSGNAIAATLEGMRPLMIEVQALVSTAVYGTP
QRSATGFNAKRLNMLLAVLEKRAGFRLGAKDVFLNITGGITVDDPAIDLAVVASILSSNEDVALPKDVCFAAEVGLSGEI
RPVQRVEQRILEAEKLGFSTIFVSKYNKISLKNTVIKVQLISKIEDLVDALI

Nucleotide

• Length: 1359 bp

>NTDB_id=655855 MBM09_RS02785 WP_238675330.1 630671..632029(+) (radA) [Flaviramulus sp. BrNp1-15]
ATGGCAAAAGTAAAAACGACGTTTTTCTGCCAGAATTGTGGTACACAATACGCTAAATGGCAAGGGCAATGTAATGCCTG
TAAAGAATGGAATACTATTGTTGAAGAGGTTATTCAAAAACCTGAAAAAAGTGATTGGAAAACATCGAATTCAACAATTA
AAAGGGTATCTGTACCATTACGAATTAATGAAATAGATGCTTCAAAAGAAGCCCGATTAGATACCTTTGATGCTGAATTT
AATCGCGTTCTAGGTGGCGGAATTGTTCCAGGTTCATTAACACTTTTAGGCGGGGAACCAGGAATTGGAAAAAGTACTTT
ACTCCTTCAGGTTTCCTTAAAATTACCATATAAAACCTTATATGTTTCAGGTGAGGAAAGCCAGAAACAAATAAAAATGC
GTGCAGAACGCATTAATCCAGAAAACAATAACTGTTATATTCTTACAGAAACTAAAACGCAAAATATCTTTAAGCAAATA
GAGGCTTTAGAACCCGATATTGTAATTATAGACTCTATTCAAACCTTGCATAGTGATTATATTGAATCGTCTTCAGGAAG
CATTTCGCAAATAAAAGAATGCACTACAGAGCTTATAAAATTTGCTAAGGAAACCGCTACACCTGTTGTTTTAATTGGTC
ATATTACTAAAGATGGTAATATAGCTGGTCCAAAAATTTTAGAGCATATGGTAGATACAGTTCTGCAATTTGAAGGTGAC
CGCAATCATGTTTTTAGAATTTTAAGAGCTCATAAAAATAGATTTGGATCTACAAACGAATTAGGAATTTATGAAATGCA
AGGTTCTGGTTTACGAGAAGTTTCAAACCCATCAGAAATTTTAATATCTAAAAAAGACGAAGAATTATCTGGTAACGCTA
TTGCTGCTACTTTAGAAGGTATGCGTCCATTAATGATAGAAGTTCAGGCTTTGGTAAGTACAGCTGTATATGGTACTCCG
CAACGTAGCGCCACGGGTTTTAATGCAAAACGCTTAAATATGTTGCTTGCAGTTTTAGAAAAACGCGCTGGTTTTAGATT
AGGAGCAAAAGATGTGTTTTTAAATATTACCGGTGGTATTACCGTTGATGATCCTGCAATAGATTTAGCTGTAGTGGCTT
CAATATTATCATCAAATGAAGATGTTGCCTTACCAAAAGATGTATGTTTTGCTGCAGAAGTTGGTTTATCTGGAGAAATT
CGTCCAGTACAACGCGTAGAACAACGTATACTAGAAGCTGAAAAACTTGGCTTTTCAACAATATTTGTATCCAAATACAA
TAAAATTTCACTTAAAAATACAGTAATTAAAGTTCAACTTATTTCAAAAATTGAAGATTTAGTTGATGCATTAATTTAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-35)

• Subunit ChlI of Mg-chelatase (ChlI) (327-427)

• AAA domain (AAA_25) (68-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus mitis SK321	48.775	99.336	0.485
radA	Bacillus subtilis subsp. subtilis str. 168	50.698	95.133	0.482
radA	Streptococcus pneumoniae R6	49.885	95.796	0.478
radA	Streptococcus pneumoniae TIGR4	49.885	95.796	0.478
radA	Streptococcus mitis NCTC 12261	49.885	95.796	0.478
radA	Streptococcus pneumoniae D39	49.885	95.796	0.478
radA	Streptococcus pneumoniae Rx1	49.885	95.796	0.478