Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MC377_RS14715 Genome accession   NZ_CP092075
Coordinates   2920129..2920734 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica strain P281972     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2915129..2925734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MC377_RS14700 (MC377_14700) helD 2915346..2917400 (-) 2055 WP_238727885.1 DNA helicase IV -
  MC377_RS14705 (MC377_14705) - 2917524..2917970 (+) 447 WP_001261222.1 YccF domain-containing protein -
  MC377_RS14710 (MC377_14710) yccS 2917989..2920142 (+) 2154 WP_000950867.1 YccS family putative transporter -
  MC377_RS14715 (MC377_14715) sxy/tfoX 2920129..2920734 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  MC377_RS14720 (MC377_14720) sulA 2920951..2921460 (+) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  MC377_RS14725 (MC377_14725) ompA 2921817..2922869 (+) 1053 WP_024136609.1 porin OmpA -
  MC377_RS14730 (MC377_14730) matP 2922941..2923393 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  MC377_RS14735 (MC377_14735) - 2923579..2925339 (+) 1761 WP_000156458.1 Lon protease family protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=655819 MC377_RS14715 WP_001202375.1 2920129..2920734(-) (sxy/tfoX) [Salmonella enterica strain P281972]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=655819 MC377_RS14715 WP_001202375.1 2920129..2920734(-) (sxy/tfoX) [Salmonella enterica strain P281972]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACTGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCCCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGTTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751