Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OXB_RS02855 Genome accession   NZ_AP013294
Coordinates   539220..540170 (-) Length   316 a.a.
NCBI ID   WP_041071738.1    Uniprot ID   A0A0A8JE36
Organism   Bacillus sp. OxB-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 534220..545170
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OXB_RS02835 (OXB_0527) - 534293..536323 (-) 2031 WP_041071731.1 FapA family protein -
  OXB_RS02840 (OXB_0528) - 536485..537453 (-) 969 WP_041076202.1 siderophore ABC transporter substrate-binding protein -
  OXB_RS02845 (OXB_0529) - 537519..538280 (-) 762 WP_041071733.1 ATP-binding cassette domain-containing protein -
  OXB_RS02850 (OXB_0530) - 538277..539227 (-) 951 WP_041071735.1 iron chelate uptake ABC transporter family permease subunit -
  OXB_RS02855 (OXB_0531) ceuB 539220..540170 (-) 951 WP_041071738.1 ABC transporter permease Machinery gene
  OXB_RS02860 (OXB_0532) - 540690..541619 (-) 930 WP_070098220.1 DUF6612 family protein -
  OXB_RS02865 (OXB_0533) hflX 541875..543146 (-) 1272 WP_041071742.1 GTPase HflX -
  OXB_RS02870 (OXB_0534) - 543209..543895 (-) 687 WP_041071744.1 VOC family protein -
  OXB_RS02875 (OXB_0535) - 543988..544275 (-) 288 WP_052483843.1 zinc ribbon domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34910.26 Da        Isoelectric Point: 10.0346

>NTDB_id=65573 OXB_RS02855 WP_041071738.1 539220..540170(-) (ceuB) [Bacillus sp. OxB-1]
MKKRYLIIALIILSFLSLFVGVSHISPMDLLDFQSEETEIFLISRLPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANASTLEKMVVAFAFALAGTLLFMQILDRIKFKDAIFIPLVGLMFGNILSSITTFFAYKANVI
QNMSAWLQGDFSMIMKGRYELLYISVPVLIITYLYANRFTVAGMGEDFSKNLGLAYKRIVNIGLILVALITTTVVLTVGM
IPFLGLIIPNIVSIFKGDHLQKTLPHTALLGAIFLLICDILGRILIYPYEISISLMVGVIGSAIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=65573 OXB_RS02855 WP_041071738.1 539220..540170(-) (ceuB) [Bacillus sp. OxB-1]
ATGAAGAAACGTTACTTGATCATCGCTTTAATCATCCTATCATTCCTATCTCTATTTGTAGGAGTGAGCCATATTTCACC
GATGGATCTGCTAGATTTCCAGTCGGAAGAGACGGAGATTTTTTTAATCAGCCGTTTGCCAAGGCTTGTTGCCATTCTGC
TCGCCGGAGCGGGGATGAGTATCGCAGGTCTTATTATGCAGCAGTTGAGCCGAAATAAGTTCGTTTCACCGACAACAGCT
GGTACATTGGACGCGACAAGGCTCGGAATTTTGGTTTCGATGCTATTGTTCGCGAACGCCTCAACACTTGAGAAAATGGT
TGTCGCCTTTGCATTTGCGCTTGCCGGCACGCTGTTGTTTATGCAAATCTTGGACCGTATCAAGTTCAAGGACGCGATTT
TCATTCCACTCGTCGGGTTGATGTTCGGGAATATCTTGTCGTCGATCACTACGTTCTTCGCTTATAAAGCGAATGTGATC
CAAAACATGTCGGCTTGGCTGCAGGGCGATTTCTCGATGATCATGAAGGGACGTTACGAACTTCTTTACATAAGTGTACC
GGTGCTTATCATTACGTATTTGTATGCGAACCGTTTCACGGTTGCGGGGATGGGAGAGGACTTTTCCAAAAACCTCGGCC
TCGCTTATAAACGGATTGTCAATATAGGATTGATTTTGGTGGCGCTCATTACGACTACTGTTGTGTTGACCGTCGGCATG
ATTCCGTTTTTAGGGCTGATCATTCCGAATATCGTTTCGATTTTCAAAGGAGATCACTTACAGAAAACCTTGCCGCATAC
AGCGTTGCTCGGCGCAATCTTCTTGCTCATCTGCGACATACTTGGACGGATCCTCATTTATCCGTACGAGATTTCCATCA
GCTTGATGGTCGGTGTCATCGGCAGCGCGATCTTCCTCTACTTGCTGTTTAGGAGGAAGGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8JE36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.355

99.051

0.528

Multiple sequence alignment