Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AH5611_RS07270 | Genome accession | NZ_CP092055 |
| Coordinates | 1528333..1528632 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain USA600 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1523333..1533632
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AH5611_RS07245 (AH5611_001405) | gcvPA | 1524545..1525891 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| AH5611_RS07250 (AH5611_001406) | gcvT | 1525911..1527002 (-) | 1092 | WP_000093344.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AH5611_RS07255 (AH5611_001407) | - | 1527161..1527685 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| AH5611_RS07260 | - | 1527675..1527821 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| AH5611_RS07265 (AH5611_001408) | comGF | 1527918..1528415 (-) | 498 | WP_001796472.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AH5611_RS07270 (AH5611_001409) | comGE | 1528333..1528632 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AH5611_RS07275 (AH5611_001410) | comGD | 1528619..1529065 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AH5611_RS07280 (AH5611_001411) | comGC | 1529043..1529354 (-) | 312 | WP_000472255.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AH5611_RS07285 (AH5611_001412) | comGB | 1529368..1530438 (-) | 1071 | WP_000776409.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AH5611_RS07290 (AH5611_001413) | comGA | 1530410..1531384 (-) | 975 | WP_000697223.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AH5611_RS07295 (AH5611_001414) | - | 1531436..1532059 (-) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| AH5611_RS07300 (AH5611_001415) | - | 1532056..1532385 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AH5611_RS07305 (AH5611_001416) | - | 1532385..1533371 (-) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| AH5611_RS07310 | - | 1533368..1533571 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=655470 AH5611_RS07270 WP_000844413.1 1528333..1528632(-) (comGE) [Staphylococcus aureus strain USA600]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=655470 AH5611_RS07270 WP_000844413.1 1528333..1528632(-) (comGE) [Staphylococcus aureus strain USA600]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |