Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | MCR19_RS07700 | Genome accession | NZ_CP092040 |
| Coordinates | 1639823..1640428 (+) | Length | 201 a.a. |
| NCBI ID | WP_001202375.1 | Uniprot ID | A0A5I0N148 |
| Organism | Salmonella enterica subsp. enterica serovar Infantis strain S19 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1606222..1648688 | 1639823..1640428 | within | 0 |
Gene organization within MGE regions
Location: 1606222..1648688
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MCR19_RS07570 (MCR19_07570) | ldtD | 1606262..1608109 (+) | 1848 | WP_000925896.1 | L,D-transpeptidase | - |
| MCR19_RS07575 (MCR19_07575) | - | 1608369..1608917 (+) | 549 | WP_000357052.1 | YcbK family protein | - |
| MCR19_RS07580 (MCR19_07580) | - | 1608945..1609592 (+) | 648 | WP_001109471.1 | MBL fold metallo-hydrolase | - |
| MCR19_RS07585 (MCR19_07585) | - | 1609690..1610945 (+) | 1256 | WP_086016038.1 | IS3-like element ISSen1 family transposase | - |
| MCR19_RS07590 (MCR19_07590) | aspC | 1610969..1612159 (-) | 1191 | WP_000462653.1 | aspartate transaminase | - |
| MCR19_RS07595 (MCR19_07595) | ompF | 1612344..1613435 (-) | 1092 | WP_000977709.1 | porin OmpF | - |
| MCR19_RS07600 (MCR19_07600) | asnS | 1614042..1615442 (-) | 1401 | WP_023993514.1 | asparagine--tRNA ligase | - |
| MCR19_RS07605 (MCR19_07605) | - | 1615643..1616104 (-) | 462 | WP_000762342.1 | Lrp/AsnC family transcriptional regulator | - |
| MCR19_RS07610 (MCR19_07610) | dpaL | 1616421..1617635 (+) | 1215 | WP_020438006.1 | diaminopropionate ammonia-lyase | - |
| MCR19_RS07615 (MCR19_07615) | - | 1617881..1619314 (+) | 1434 | WP_000893191.1 | alanine/glycine:cation symporter family protein | - |
| MCR19_RS07620 (MCR19_07620) | pncB | 1619395..1620597 (-) | 1203 | WP_023993513.1 | nicotinate phosphoribosyltransferase | - |
| MCR19_RS07625 (MCR19_07625) | pepN | 1620864..1623476 (+) | 2613 | WP_023993512.1 | aminopeptidase N | - |
| MCR19_RS07630 (MCR19_07630) | pyrD | 1623684..1624694 (+) | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| MCR19_RS07635 (MCR19_07635) | zapC | 1624860..1625402 (+) | 543 | WP_023993511.1 | cell division protein ZapC | - |
| MCR19_RS07640 (MCR19_07640) | - | 1625399..1626508 (-) | 1110 | WP_023993510.1 | YcbX family protein | - |
| MCR19_RS07645 (MCR19_07645) | rlmKL | 1626607..1628715 (+) | 2109 | WP_023993509.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| MCR19_RS07650 (MCR19_07650) | - | 1628728..1630635 (+) | 1908 | WP_023993508.1 | ABC transporter ATP-binding protein | - |
| MCR19_RS07655 (MCR19_07655) | pqiA | 1630650..1631903 (+) | 1254 | WP_000333152.1 | membrane integrity-associated transporter subunit PqiA | - |
| MCR19_RS07660 (MCR19_07660) | pqiB | 1631908..1633548 (+) | 1641 | WP_000433414.1 | intermembrane transport protein PqiB | - |
| MCR19_RS07665 (MCR19_07665) | pqiC | 1633545..1634108 (+) | 564 | WP_000759136.1 | membrane integrity-associated transporter subunit PqiC | - |
| MCR19_RS07670 (MCR19_07670) | rmf | 1634364..1634531 (+) | 168 | WP_001537784.1 | ribosome modulation factor | - |
| MCR19_RS07675 (MCR19_07675) | fabA | 1634631..1635149 (-) | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| MCR19_RS07680 (MCR19_07680) | - | 1635218..1636978 (-) | 1761 | WP_000156457.1 | AAA family ATPase | - |
| MCR19_RS07685 (MCR19_07685) | matP | 1637164..1637616 (+) | 453 | WP_000877172.1 | macrodomain Ter protein MatP | - |
| MCR19_RS07690 (MCR19_07690) | ompA | 1637688..1638740 (-) | 1053 | WP_001670727.1 | porin OmpA | - |
| MCR19_RS07695 (MCR19_07695) | sulA | 1639097..1639606 (-) | 510 | WP_000288732.1 | SOS-induced cell division inhibitor SulA | - |
| MCR19_RS07700 (MCR19_07700) | sxy/tfoX | 1639823..1640428 (+) | 606 | WP_001202375.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| MCR19_RS07705 (MCR19_07705) | yccS | 1640415..1642568 (-) | 2154 | WP_000950876.1 | YccS family putative transporter | - |
| MCR19_RS07710 (MCR19_07710) | - | 1642587..1643033 (-) | 447 | WP_023993507.1 | YccF domain-containing protein | - |
| MCR19_RS07715 (MCR19_07715) | helD | 1643157..1645211 (+) | 2055 | WP_023993506.1 | DNA helicase IV | - |
| MCR19_RS07720 (MCR19_07720) | mgsA | 1645247..1645705 (-) | 459 | WP_023993505.1 | methylglyoxal synthase | - |
| MCR19_RS07725 (MCR19_07725) | - | 1645800..1646462 (-) | 663 | WP_000847719.1 | DUF2057 family protein | - |
| MCR19_RS07730 (MCR19_07730) | - | 1646636..1647049 (+) | 414 | WP_001537782.1 | CoA-binding protein | - |
| MCR19_RS07735 (MCR19_07735) | hspQ | 1647094..1647411 (-) | 318 | WP_000561983.1 | heat shock protein HspQ | - |
| MCR19_RS07740 (MCR19_07740) | rlmI | 1647469..1648680 (-) | 1212 | WP_000140480.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23174.94 Da Isoelectric Point: 8.7403
>NTDB_id=655346 MCR19_RS07700 WP_001202375.1 1639823..1640428(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain S19]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
Nucleotide
Download Length: 606 bp
>NTDB_id=655346 MCR19_RS07700 WP_001202375.1 1639823..1640428(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain S19]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
75.879 |
99.005 |
0.751 |