Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   MBG98_RS03340 Genome accession   NZ_CP092038
Coordinates   701340..703547 (-) Length   735 a.a.
NCBI ID   WP_061475247.1    Uniprot ID   -
Organism   Legionella pneumophila strain 11052018-5     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 696340..708547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MBG98_RS03320 (MBG98_03320) - 696845..698773 (-) 1929 WP_061475245.1 hypothetical protein -
  MBG98_RS03325 (MBG98_03325) - 698898..699290 (-) 393 WP_014843464.1 hypothetical protein -
  MBG98_RS03330 (MBG98_03330) - 699427..699804 (+) 378 WP_014841112.1 hypothetical protein -
  MBG98_RS03335 (MBG98_03335) - 700005..701312 (+) 1308 WP_014843465.1 tetratricopeptide repeat protein -
  MBG98_RS03340 (MBG98_03340) comEC 701340..703547 (-) 2208 WP_061475247.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MBG98_RS03345 (MBG98_03345) pilE 703625..704074 (-) 450 WP_027224581.1 type IV pilin protein Machinery gene
  MBG98_RS03350 (MBG98_03350) - 704086..707595 (-) 3510 WP_061475249.1 pilus assembly protein -
  MBG98_RS03355 (MBG98_03355) - 707608..708120 (-) 513 WP_014843468.1 pilus assembly PilX family protein -

Sequence

Protein


Download         Length: 735 a.a.        Molecular weight: 83069.65 Da        Isoelectric Point: 9.6732

>NTDB_id=655279 MBG98_RS03340 WP_061475247.1 701340..703547(-) (comEC) [Legionella pneumophila strain 11052018-5]
MEIFCFLIGVLYAYTYNIYLTIAIPLLFYITPRYPIVLFFIAGCGFALIHQWIVSPKGIPDTQVITQAQLEGTIASIPMQ
RPNKTQFHFAIEKINNNPAQGLIQLNWYNKPPVLRAGQRWQLSVKLKKPRNFHNPGGFNYVSYLAARHIHWTGYIRYGNN
KLISNQPPSFSWLALREKIGDALTKLAPDTETAGIIEALTLNVTHHISSDHWNLFRRTGTVHLFGISGEHIALVSGIFFI
VIRWIWSMNYRCCLFLPANTIASIGGLLAALPYAFLAGFEPPVQRALIGCVLYTIYAIGKQRFTPWQIWRYALFLVLCIE
PHAVFLQGFYFSFLAVACLLLTHQRWPLKNYKKTLALQLSCLIGLMPLTLHWYSYGSINGFLANLFAIPLVSFLIVPLAL
MTMITSPFHWSWILMKPLAWLVALLLQGLTYVEQIAGINITWSITSVTMMLAMTAGLFLRVLLPVKPFKHLAILWIILPL
FPPRTAIYPGEALINILDVGQGLAVAIQTQHHVLLYDTGDSYFQGSDLGQMAIIPFFRSIGIKTIDKIVISHPDKDHKGG
LNSLEKEMQVNQLIVNDPYFYKRGSICHSYPQWQWDGVSFRFLPIRESFNKKNNNSCILQVSNSAGRVLLTGDIEKAAEE
YLVRNYGSQLASEILVVPHHGSKTSSSYRFLLEVNPLYAIASLGFDNRFKFPHSKTLQSMKTLGITFFRTDECGMAGIKL
PASGKINKPTCMQAE

Nucleotide


Download         Length: 2208 bp        

>NTDB_id=655279 MBG98_RS03340 WP_061475247.1 701340..703547(-) (comEC) [Legionella pneumophila strain 11052018-5]
ATGGAAATTTTTTGCTTTTTAATAGGCGTACTTTATGCCTATACCTATAATATTTATCTAACTATTGCGATTCCTTTACT
CTTTTATATCACACCAAGATATCCAATTGTTCTGTTCTTCATTGCCGGCTGTGGCTTTGCCCTGATTCATCAGTGGATTG
TATCTCCCAAGGGCATACCTGATACGCAAGTAATCACACAAGCCCAATTGGAAGGAACAATTGCTTCCATCCCCATGCAA
CGTCCTAACAAAACCCAATTCCATTTTGCAATTGAAAAAATTAATAATAACCCTGCTCAAGGCCTGATCCAATTAAACTG
GTATAACAAACCACCTGTCTTACGAGCCGGTCAGCGATGGCAACTTTCAGTGAAACTAAAAAAACCTCGTAACTTCCACA
ACCCGGGAGGTTTTAATTATGTAAGTTACCTGGCGGCTCGTCATATCCATTGGACTGGCTATATTCGTTATGGGAATAAT
AAGCTAATTAGCAATCAACCCCCTTCTTTCAGTTGGTTAGCACTACGTGAAAAAATAGGGGATGCTTTGACAAAACTGGC
GCCGGATACAGAAACGGCAGGCATCATCGAAGCATTGACATTAAATGTTACTCACCATATCAGTTCAGATCATTGGAATT
TGTTCCGAAGAACAGGAACGGTACATTTATTCGGGATTTCAGGAGAGCACATCGCTCTGGTCTCCGGCATTTTCTTTATA
GTGATAAGATGGATTTGGTCAATGAACTATCGTTGCTGTTTGTTCTTACCAGCCAATACCATAGCGAGTATCGGTGGATT
ACTGGCTGCCTTGCCCTATGCTTTTTTAGCCGGGTTTGAGCCTCCTGTACAACGTGCTTTAATTGGTTGTGTACTTTACA
CAATATACGCCATAGGAAAACAACGTTTTACACCATGGCAAATATGGAGATATGCCTTATTTTTAGTCTTGTGTATTGAG
CCCCATGCCGTATTCCTGCAAGGTTTTTATTTTTCATTTCTTGCCGTGGCCTGTCTTCTTTTGACTCATCAACGCTGGCC
ACTGAAAAATTATAAAAAAACACTGGCATTACAATTAAGTTGCCTCATTGGATTGATGCCTTTGACTCTCCATTGGTACT
CCTATGGTTCTATCAATGGATTTCTTGCCAATTTATTCGCCATACCTTTAGTCAGTTTTCTGATAGTACCCTTGGCTTTA
ATGACTATGATAACGAGTCCATTTCATTGGTCCTGGATATTGATGAAACCATTGGCGTGGCTTGTTGCCCTGTTACTGCA
AGGACTAACATATGTTGAACAAATAGCAGGGATCAATATCACCTGGTCCATCACCTCAGTAACAATGATGCTGGCTATGA
CAGCAGGTCTGTTTTTAAGGGTATTATTACCTGTTAAGCCATTCAAACACTTGGCTATCCTTTGGATTATCCTTCCCTTA
TTTCCGCCTCGTACTGCAATTTATCCAGGGGAAGCATTAATTAATATTTTGGATGTTGGGCAAGGACTTGCCGTTGCGAT
ACAAACGCAACATCATGTTTTACTCTACGACACGGGAGATTCCTACTTTCAGGGGAGTGATTTAGGGCAAATGGCGATAA
TCCCCTTTTTCAGGTCAATTGGAATAAAAACAATTGACAAAATAGTAATAAGCCATCCCGATAAAGATCATAAGGGCGGG
TTAAATTCCCTTGAAAAAGAGATGCAAGTCAATCAATTAATAGTGAATGATCCCTATTTTTATAAACGTGGAAGTATTTG
TCATTCATACCCGCAATGGCAATGGGATGGGGTGAGCTTTCGTTTTTTACCTATCAGGGAATCTTTCAATAAAAAAAATA
ACAATTCTTGTATCTTACAGGTAAGTAATTCGGCTGGCAGGGTTTTGTTAACGGGAGATATTGAAAAAGCAGCTGAGGAG
TACCTGGTAAGAAACTACGGCAGTCAGCTGGCATCCGAAATTTTAGTTGTGCCTCATCATGGGAGCAAAACGTCTTCATC
CTATCGATTTTTGCTGGAAGTAAACCCGCTTTATGCCATTGCATCTTTAGGATTTGATAATCGCTTCAAATTTCCACATT
CTAAAACTTTGCAAAGCATGAAAACATTAGGTATCACTTTTTTTAGAACAGACGAATGCGGAATGGCAGGAATCAAACTA
CCTGCGTCAGGTAAAATTAACAAACCAACCTGTATGCAGGCTGAATAA

Domains

Predicted by InterproScan.

Domain of unknown function (DUF4131) (DUF4131)

(22-158)

Metallo-beta-lactamase superfamily (Lactamase_B)

(498-580)

Competence protein (Competence)

(199-464)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Legionella pneumophila strain Lp02

98.638

99.864

0.985
  comEC Legionella pneumophila strain ERS1305867

97.007

100

0.97